TABLE 1.
Information of CsGARP genes identified in tea plant.
| Sub-Family | Gene_ID | CsGARP names | Chromosome |
Amino acid size | Mw (kD) | PI | GRAVY | Instability index II | Aliphatic index | Subcellular location | ||
| Location | Start | End | ||||||||||
| ARR-B | CSS0008648.1 | CsARR-B1b | Contig78 | 165516 | 167706 | 287 | 32.75 | 6.25 | −0.6 | 47.23 | 82.44 | cyto,cysk,nucl |
| CSS0010394.1 | CsARR-B4d | Contig534 | 58324 | 68671 | 676 | 73.59 | 6.4 | −0.429 | 52.99 | 79.75 | nucl | |
| CSS0013426.1 | CsARR-B2d | Chr10 | 8419100 | 8424797 | 594 | 66.61 | 6.51 | −0.513 | 46.66 | 77.74 | nucl | |
| CSS0017468.1 | CsARR-B2b | Chr11 | 27269355 | 27273709 | 572 | 64.59 | 6.42 | −0.456 | 41.91 | 85.17 | cyto,nucl | |
| CSS0024071.1 | CsARR-B4a | Chr12 | 27400297 | 27419246 | 667 | 71.89 | 6.74 | −0.379 | 53.97 | 82.14 | nucl | |
| CSS0024543.1 | CsARR-B3a | Chr11 | 6235734 | 6237292 | 399 | 45.28 | 5.45 | −0.682 | 51.41 | 73.76 | nucl | |
| CSS0035353.1 | CsARR-B1a | Chr6 | 161617767 | 161619797 | 283 | 32.33 | 6.43 | −0.602 | 45.56 | 82.58 | cyto,cysk,nucl | |
| CSS0037737.1 | CsARR-B2a | Chr6 | 7338807 | 7343330 | 571 | 64.57 | 6.1 | −0.474 | 42.13 | 80.37 | nucl,cyto | |
| CSS0039789.1 | CsARR-B2c | Chr10 | 9042578 | 9047999 | 594 | 66.61 | 6.51 | −0.513 | 46.66 | 77.74 | Nucl | |
| CSS0042562.1 | CsARR-B4c | Chr6 | 41056441 | 41066639 | 685 | 74.68 | 6.86 | −0.463 | 52.44 | 78.28 | Nucl | |
| CSS0043810.1 | CsARR-B4b | Contig364 | 2958 | 21280 | 667 | 71.96 | 6.87 | −0.393 | 54.97 | 81.56 | Nucl | |
| CSS0049738.1 | CsARR-B3b | Chr9 | 6270660 | 6276132 | 678 | 74.58 | 5.72 | −0.492 | 51.73 | 76.64 | Nucl | |
| CSS0037714.2 | CsAPRR1 | Chr14 | 34336782 | 34343114 | 553 | 61.75 | 5.37 | −0.591 | 54.81 | 71.92 | nucl,cyto | |
| GLK | CSS0026556.1 | CsMTF3 | Chr10 | 143873558 | 143874584 | 291 | 31.90 | 6.8 | −0.312 | 58.14 | 75.12 | nucl_plas, golg, nucl |
| CSS0041137.1 | CsMTF1 | Chr13 | 40176187 | 40178190 | 292 | 31.59 | 6.8 | −0.508 | 59.83 | 70.21 | nucl, nucl_plas | |
| CSS0044249.1 | CsMTF2 | Chr10 | 144027289 | 144029380 | 289 | 31.27 | 6.73 | −0.535 | 54.75 | 66.57 | nucl, nucl_plas | |
| CSS0003719.1 | CsBOA1 | Chr11 | 66026281 | 66028864 | 317 | 34.90 | 6.32 | −0.653 | 46.66 | 64.01 | nucl | |
| CSS0034150.1 | CsPCL1 | Chr4 | 138908304 | 138910584 | 297 | 32.95 | 5.76 | −0.644 | 54.6 | 71.55 | nucl | |
| CSS0000687.1 | CsGLK1 | Chr7 | 58555200 | 58559618 | 439 | 47.44 | 6.77 | −0.653 | 56.28 | 62.41 | nucl | |
| CSS0001889.1 | CsGLK2 | Chr5 | 109020611 | 109028465 | 432 | 47.76 | 6.97 | −0.603 | 60.36 | 72.66 | nucl,chlo,cyto | |
| CSS0036016.1 | CsGLK3 | Chr5 | 108867197 | 108881249 | 439 | 48.48 | 6.59 | −0.601 | 66.67 | 73.51 | nucl,cyto,chlo | |
| KAN | CSS0001412.1 | CsKAN1f | Chr12 | 126646066 | 126651938 | 353 | 39.60 | 7.91 | −0.838 | 51.3 | 58.61 | nucl |
| CSS0003450.1 | CsKAN2c | Chr8 | 134932824 | 134935058 | 409 | 46.68 | 8.34 | −0.916 | 56.37 | 64.55 | nucl | |
| CSS0004133.1 | CsKAN1c | Chr1 | 125927391 | 125948401 | 387 | 42.88 | 7.22 | −0.739 | 58.09 | 64.03 | nucl | |
| CSS0006502.1 | CsKAN2f | Chr4 | 131665280 | 131667056 | 323 | 36.62 | 6.84 | −0.799 | 49.72 | 69.72 | nucl,cyto | |
| CSS0006880.1 | CsKAN1a | Chr9 | 123807459 | 123810794 | 324 | 36.21 | 7.53 | −0.69 | 45.67 | 64.69 | nucl,cyto_nucl | |
| CSS0011420.1 | CsKAN2i | Chr4 | 188988816 | 188990564 | 341 | 38.52 | 7.83 | −0.931 | 64.31 | 65.78 | nucl | |
| CSS0018275.1 | CsKAN2d | Contig865 | 98336 | 100569 | 425 | 48.69 | 8.06 | −0.897 | 54.88 | 63.72 | nucl | |
| CSS0021269.1 | CsKAN1h | Contig14 | 16493 | 22502 | 366 | 41.36 | 8.29 | −0.886 | 53.68 | 54.37 | nucl | |
| CSS0023102.1 | CsKAN1b | Chr4 | 17185120 | 17189339 | 313 | 34.64 | 7.5 | −0.599 | 36.54 | 62.62 | nucl | |
| CSS0023934.1 | CsKAN1e | Chr1 | 117052444 | 117054662 | 249 | 27.85 | 10.62 | −0.608 | 61.22 | 64.62 | chlo,nucl | |
| CSS0031744.1 | CsKAN2e | Contig287 | 79856 | 81708 | 365 | 41.09 | 6.68 | −1.029 | 52.25 | 63.04 | nucl | |
| CSS0039972.1 | CsKAN1d | Chr2 | 55963193 | 55972892 | 452 | 50.17 | 7.37 | −0.764 | 58.37 | 61.88 | nucl | |
| CSS0043198.1 | CsKAN2h | Chr10 | 140457503 | 140458436 | 161 | 17.95 | 9.71 | −0.765 | 66 | 71.37 | nucl | |
| CSS0043572.1 | CsKAN2b | Contig1113 | 259705 | 261760 | 236 | 27.00 | 6.51 | −0.915 | 66.06 | 57.84 | nucl,cyto_nucl | |
| CSS0047374.1 | CsKAN1g | Chr14 | 30539257 | 30541051 | 136 | 15.52 | 10.52 | −0.788 | 60.22 | 46.64 | mito,nucl,cyto_nucl | |
| CSS0047937.1 | CsKAN2a | Chr6 | 45661755 | 45663836 | 237 | 27.13 | 6.51 | −0.926 | 66.64 | 57.59 | nucl,cyto_nucl,mito | |
| CSS0049732.1 | CsKAN2g | Chr10 | 140910339 | 140911272 | 161 | 17.95 | 9.71 | −0.765 | 66 | 71.37 | nucl | |
| NIGT1/HRS1 /HHO |
CSS0006078.1 | CsNIGT1b | Chr10 | 32873850 | 32875167 | 286 | 32.05 | 6.57 | −0.953 | 63.41 | 62.73 | nucl |
| CSS0007741.1 | CsNIGT2a | Chr6 | 61166921 | 61169904 | 476 | 51.90 | 6.98 | −0.781 | 56.9 | 61.16 | nucl | |
| CSS0007827.1 | CsNIGT2c | Chr14 | 95838707 | 95841430 | 457 | 50.28 | 6.86 | −0.801 | 60.93 | 60.88 | nucl | |
| CSS0014748.1 | CsNIGT2g | Chr4 | 106104011 | 106107124 | 389 | 43.69 | 6.52 | −0.904 | 71.75 | 60.41 | nucl | |
| CSS0031217.1 | CsNIGT1a | Chr6 | 28314264 | 28318894 | 284 | 32.30 | 9.7 | −0.833 | 58.77 | 68.35 | nucl,cyto_nucl | |
| CSS0031258.1 | CsNIGT1c | Chr10 | 32618279 | 32621692 | 396 | 43.66 | 7.88 | −1.044 | 71.77 | 55.23 | nucl | |
| CSS0031273.1 | CsNIGT2b | Chr6 | 60415340 | 60418566 | 476 | 51.99 | 7.07 | −0.79 | 57.82 | 61.16 | nucl | |
| CSS0044539.1 | CsNIGT2e | Chr1 | 194296853 | 194299074 | 285 | 31.93 | 8.5 | −0.541 | 45.18 | 82.74 | nucl,cyto | |
| CSS0044591.1 | CsNIGT2d | Contig1019 | 353441 | 356364 | 458 | 50.40 | 6.88 | −0.806 | 60.57 | 60.52 | nucl | |
| CSS0049001.1 | CsNIGT2f | Chr3 | 14497450 | 14499730 | 384 | 42.55 | 8.47 | −0.77 | 58.48 | 69.82 | nucl | |
| PHR1/PHL1 | CSS0005408.1 | CsPHL5b | Chr13 | 1851896 | 1854544 | 374 | 41.90 | 7.23 | −0.86 | 70.24 | 57.43 | nucl |
| CSS0006111.1 | CsPHL2a | Chr12 | 122342467 | 122346104 | 283 | 31.70 | 9.5 | −0.714 | 32.15 | 77.84 | nucl,cyto | |
| CSS0008911.1 | CsPHL4c | Contig149 | 492337 | 498750 | 338 | 36.60 | 6.8 | −0.644 | 50.85 | 72.4 | nucl,chlo | |
| CSS0015223.1 | CsPHL6a | Chr13 | 77400743 | 77410969 | 486 | 52.88 | 5.05 | −0.631 | 59.62 | 67.86 | nucl | |
| CSS0017966.1 | CsPHL5a | Chr13 | 899787 | 902692 | 411 | 46.26 | 7.26 | −0.854 | 57.71 | 67.68 | nucl | |
| CSS0018618.1 | CsPHL1a | Chr12 | 76523537 | 76525316 | 339 | 38.14 | 7.77 | −0.847 | 47.33 | 67.58 | nucl | |
| CSS0019219.1 | CsPHL4a | Chr10 | 137618503 | 137623650 | 271 | 30.91 | 8.42 | −0.62 | 56.01 | 68.45 | nucl,cyto_nucl | |
| CSS0019363.1 | CsPHL6b | Contig1181 | 174525 | 186979 | 468 | 51.33 | 5.05 | −0.662 | 61.82 | 68.57 | nucl | |
| CSS0023343.1 | CsPHL2c | Contig1143 | 718099 | 720828 | 199 | 22.65 | 10.24 | −0.744 | 48.66 | 77.39 | cyto,pero,nucl | |
| CSS0023963.1 | CsPHL3a | Chr9 | 30619262 | 30626930 | 295 | 31.91 | 6.86 | −0.329 | 43.98 | 86.34 | nucl | |
| CSS0026971.1 | CsPHL6c | Chr11 | 87461530 | 87465791 | 478 | 52.28 | 5.4 | −0.633 | 63.63 | 69.23 | nucl,chlo | |
| CSS0027631.1 | CsPHL3b | Contig149 | 507717 | 515150 | 312 | 34.40 | 6.61 | −0.634 | 62.11 | 77.6 | cyto,nucl | |
| CSS0035819.1 | CsPHL6d | Contig653 | 11723 | 20908 | 478 | 52.38 | 5.4 | −0.633 | 63.67 | 70.04 | nucl,chlo | |
| CSS0038558.1 | CsPHL4b | Contig135 | 464495 | 469690 | 241 | 26.19 | 9.73 | −0.72 | 65.94 | 72.86 | chlo,nucl | |
| CSS0039772.1 | CsPHL6e | Chr7 | 76609036 | 76619955 | 488 | 54.07 | 5.46 | −0.639 | 59.68 | 68.93 | chlo,nucl | |
| CSS0041856.1 | CsPHL2b | Contig995 | 946 | 4056 | 212 | 24.05 | 10.12 | −0.701 | 44.32 | 80.47 | nucl,cyto,pero | |
| CSS0042630.3 | CsPHL6f | Chr1 | 5166865 | 5173987 | 347 | 38.74 | 5.2 | −0.859 | 54.29 | 68.56 | nucl | |
| CSS0045704.1 | CsPHL1b | Chr6 | 13777227 | 13778889 | 355 | 40.11 | 8.55 | −0.8 | 45.39 | 74.42 | nucl,chlo | |
| CSS0007601.1 | CsAPL1 | Chr7 | 699001 | 701069 | 376 | 41.68 | 8.36 | −0.71 | 53.48 | 63.59 | nucl | |
| CSS0018792.1 | CsAPL2 | Chr7 | 201928 | 204235 | 375 | 41.59 | 8.36 | −0.71 | 53.09 | 63.76 | nucl | |
| CSS0036129.1 | CsMYR1 | Chr10 | 165597219 | 165600021 | 419 | 46.74 | 7.5 | −0.74 | 43.91 | 71.67 | nucl | |