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. 2022 Jul 9;33(5):1391–1407. doi: 10.1007/s11224-022-02012-z

Table 2.

Docking results of manually optimised lead compounds

Compound name Docking score (kcal/mol) Glide g score (kcal/mol) MM-GBSA binding score (kcal/mol) Interaction residues Nature of interactions Interaction distance (Å) No. of synthetic pathways (pathfinder)
Fenbufen  −11.764  −11.819  −20.64 Fe2+ Metal co-ordination 2.31 8
His-313 Pi-Pi stacking 5.34
Tyr-303 H-bond 2.56
Tyr-329 H-bond 1.66
Arg-383 H-bond 1.70
Salt bridge 2.78
Compound A  −14.268  −14.607  −16.83 Fe2+ Metal co-ordination 2.01 3
Tyr-329 H-bond 2.83
Tyr-303 H-bond 1.82
Arg-383 H-bond 2.02
Salt bridge 2.31
Compound B  −13.611  −13.611  −29.90 Fe2+ Metal co-ordination 2.17 2
Arg-383 H-bond 2.21
Tyr-303 Salt bridge 1.90
Tyr-329 H-bond 2.49
His-313 H-bond 1.65
Asp-254 Pi-Pi stacking 3.45
Water bridge 1.75
Compound C  −11.908  −12.691  −36.38 Fe2+ Metal co-ordination 2.26 3
Tyr-303 H-bond 3.27
Tyr-329 H-bond 2.64
Arg-383 H-bond 2.87
Tyr-310 Salt bridge 2.75
Pi-Pi stacking 4.87
Compound D  −15.664  −16.205  −13.67 Fe2+ Metal co-ordination 2.19 8
Tyr-329 H-bond 1.90
Tyr-303 H-bond 2.62
Arg-383 H-bond 1.89
Salt bridge 1.01