Fig. 6.
More gut bacteria in obese individuals with type 2 diabetes are IgM-coated and the bacteria differ between individuals with type 2 diabetes vs NGT or IGT. (a) The proportion of IgM-, IgA- and IgG-bound gut microbiota from obese individuals with NGT (n = 15), IGT (n = 6) or type 2 diabetes (n = 5) was measured by flow cytometry. (b–d) IgM-bound and unbound bacterial sequencing results: α diversity, as assessed by Chao average (to determine species richness) (b); β diversity, as assessed by PCoA (c); and relative abundance of bacterial species, as determined by 16S rRNA sequencing analysis (d). All faecal samples were collected from treatment-naive individuals. Orange triangles, red triangles, purple circles represent IgM− bacteria from obese donors with NGT, IGT and type 2 diabetes, respectively; green triangles, blue triangles and yellow squares represent IgM+ bacteria from obese donors with NGT, IGT and type 2 diabetes, respectively. Data were assessed for significance using Student’s t test (a, b), Analysis of similarities (ANOSIM) (c) and multiple t tests (d). Data are presented as mean ± SD. *p<0.05, **p<0.01. T2D, type 2 diabetes