|
Experimental Models
|
| HaCaT |
Gift from Leonie Unterholzner (Lancaster University, UK) |
RRID:CVCL_0038
|
| HEK293 |
Gift from Caetano Reis e Sousa (The Francis Crick Institute, UK) |
RRID:CVCL_0045
|
| HEK293‐ISRE‐Fluc |
Generated previously in our laboratory (Bridgeman et al, 2015) |
N/A |
| HEK293T |
Gift from Caetano Reis e Sousa (The Francis Crick Institute, UK) |
RRID:CVCL_0063
|
| MeWo |
Gift from Graham Ogg (University of Oxford, UK) |
RRID:CVCL_0445
|
| THP1 cGAS KO |
This study |
N/A |
| THP1 Dual IFNAR2‐KO |
Invivogen |
Cat. #thpd‐koifnar2 |
| THP1 Dual MyD88‐KO |
Invivogen |
Cat. #thpd‐komyd |
| THP1 Dual WT |
Invivogen |
Cat. #thpd‐nfis |
| THP1 IRF3 KO |
This study |
N/A |
| THP1 MAVS KO |
This study |
N/A |
| THP1 STING KO |
Gift from Soren Paludan (Aarhus University, Denmark) (Holm et al, 2016) |
N/A |
| THP1 TBK1 KO |
Gift from Soren Paludan (Aarhus University, Denmark) (Holm et al, 2016) |
N/A |
| VZV rOka |
Gift from Jeffrey Cohen (NIH, Bethesda, USA) (Cohen & Seidel, 1993) |
N/A |
| VZV‐ORF9ecDHFR
|
Gift from Paul R. Kinchington (University of Pittsburgh, USA) (Warner et al, 2021) |
N/A |
| VZVORF9‐V5
|
Gift from Catherine Sadzot (University of Liege, Belgium) (Riva et al, 2013) |
N/A |
|
Recombinant DNA
|
| hRIG‐I‐CARD |
Gift from Andreas Pichlmair (Technical University Munich, Germany) |
N/A |
| p125‐Luc |
Gift from T. Fujita (Kyoto University, Japan) (Yoneyama et al, 2004) |
N/A |
| p8.91 |
Gift from Greg Towers (University College London) |
N/A |
| pcDNA/FLAG/hcGAS |
This study |
N/A |
| pcDNA/HA/hSTING |
This study |
N/A |
| pCMV‐3tag‐KSHV‐ORF52 |
Gift from Fanxiu Zhu (Florida State University, USA) (Wu et al, 2015) |
N/A |
| pCMV‐VSV‐G |
Gift from Bob Weinberg |
Addgene_8454 |
| pDONR/ORF22A |
Gift from Jurgen Haas (University of Edinburgh, UK) (Uetz et al, 2006) |
N/A |
| pDONR/ORF22B |
Gift from Jurgen Haas (University of Edinburgh, UK) (Uetz et al, 2006) |
N/A |
| pET‐6xHis‐SUMO2/hcGAS |
Generated in previous study (Zhou et al, 2019) |
N/A |
| pET‐6xHis‐SUMO2/ORF9 |
This study |
N/A |
| pET‐6xHis‐SUMO2/ORF9‐N |
This study |
N/A |
| pET28a/FLAG‐GFP |
This study |
N/A |
| pET28a/FLAG‐ORF9 |
This study |
N/A |
| pET28a/FLAG‐ORF9‐DM |
This study |
N/A |
| pGag‐eGFP |
NIH AIDS reagent programme |
#11468 |
| pGEX6P1 |
Gift from Martin Reijns (University of Edinburgh, UK) |
GE Healthcare |
| pGEX6P1/FLAG‐GFP |
This study |
N/A |
| pGEX6P1/FLAG‐ORF9 |
This study |
N/A |
| pGEX6P1/hcGAS |
Gift from Martin Reijns (University of Edinburgh, UK) |
N/A |
| pGEX6P1/hcGAS‐HA |
This study |
N/A |
| pLenti/FLAG/GFP |
This study |
N/A |
| pLenti/FLAG/ORF9 |
This study |
N/A |
| pLenti/FLAG/ORF9‐DM |
This study |
N/A |
| pLenti/FLAG/ORF9‐truncation‐I |
This study |
N/A |
| pLenti/FLAG/ORF9‐truncation‐II |
This study |
N/A |
| pLenti/FLAG/ORF9‐truncation‐III |
This study |
N/A |
| pLenti/FLAG/ORF9‐truncation‐IV |
This study |
N/A |
| pLenti/FLAG/ORF9‐truncation‐V |
This study |
N/A |
| pLenti/FLAG/ORF9‐truncation‐VI |
This study |
N/A |
| pLenti/FLAG/ORF9‐truncation‐VII |
This study |
N/A |
| pLenti/FLAG/ORF9‐truncation‐VIII |
This study |
N/A |
| pLenti6.3/V5/EMCV‐L |
Generated in previous study (Hertzog et al, 2018) |
N/A |
| pLenti6.3/V5/hcGAS |
This study |
N/A |
| pLenti6.3/V5/hSTING |
This study |
N/A |
| pLenti6.3/V5/VZV‐ORF |
This study. Expression library for all VZV ORFs (see Figure EV2) |
N/A |
| pRL‐TK |
Promega |
N/A |
| pX458/Ruby/hcGAS |
This study |
N/A |
| pX458/Ruby/hIRF3 |
This study |
N/A |
| pX458/Ruby/hMAVS |
Generated in previous study (Hertzog et al, 2018) |
N/A |
|
Antibodies
|
| Donkey‐anti‐mouse‐HRP (WB, 1:2,000) |
GE Healthcare |
Cat. #NA931, RRID:AB_772210 |
| Donkey‐anti‐rabbit‐HRP (WB, 1:2,000) |
GE Healthcare |
Cat. #NA934, RRID:AB_772206 |
| Goat‐anti‐rabbit‐AlexaFluor647 (IF, 1:500) |
Invitrogen |
Cat. #A21246, RRID:AB_1500778 |
| Mouse monoclonal beta‐actin‐HRP (WB, 1:10,000) |
Sigma Aldrich |
clone AC‐15, RRID:AB_262011 |
| Mouse monoclonal FLAG (IP, 5 μg/sample) |
Sigma Aldrich |
clone M2, RRID:AB_262044 |
| Mouse monoclonal FLAG‐HRP (WB, 1:10,000) |
Sigma Aldrich |
clone M2, RRID:AB_439702 |
| Mouse monoclonal HA (IP, 5 μg/sample) |
Invitrogen |
clone 2‐2.2.14, RRID:AB_10978021 |
| Mouse monoclonal RIG‐I (WB, 1:2,000) |
Calteg Medsystems |
clone Alme‐1, RRID:AB_2490189 |
| Mouse monoclonal V5 (IP, 5 μg/sample) |
Biolegend |
Cat. #680602, RRID:AB_2566387 |
| Mouse monoclonal V5‐FITC (IF, 1:400) |
Invitrogen |
Cat. #R963‐25, RRID:AB_2556567 |
| Mouse monoclonal V5‐HRP (WB, 1:5,000) |
Invitrogen |
Cat. #R961‐25, RRID:AB_2556565 |
| Mouse monoclonal VZV gE/GI (WB, 1:1,000) |
GE Healthcare |
Cat. #MAB8612, RRID:AB_2158042 |
| Mouse monoclonal VZV gE/GI‐FITC (Flow cytometry, 1:500) |
GE Healthcare, coupled in‐house to FITC |
Cat. #MAB8612, RRID:AB_2158042 |
| Mouse monoclonal VZV ORF62 (WB, 1:1,000) |
Meridian Life Science |
Cat. #C05107MA, RRID:AB_1772162 |
| Rabbit monoclonal FLAG (IF, 1:800) |
CellSignaling Technology |
clone D6W5B, RRID:AB_2572291 |
| Rabbit monoclonal hcGAS (WB, 1:1,000) |
CellSignaling Technology |
clone D1D3G, RRID:AB_2799712 |
| Rabbit monoclonal hSTING (WB, 1:1,000) |
CellSignaling Technology |
clone D2P2F, RRID:AB_2732796 |
| Rabbit monoclonal IRF3 (WB, 1:1,000) |
CellSignaling Technology |
clone D6I4C, RRID:AB_2722521 |
| Rabbit monoclonal MyD88 (WB, 1:1,000) |
CellSignaling Technology |
clone D80F5, RRID:AB_10547882 |
| Rabbit monoclonal pSTAT1 (Y701) (WB, 1:1,000) |
CellSignaling Technology |
clone 58D6, RRID:AB_561284 |
| Rabbit monoclonal pSTAT2 (WB, 1:1,000) |
CellSignaling Technology |
clone D3P2P, RRID:AB_2800123 |
| Rabbit monoclonal STAT1 (WB, 1:1,000) |
CellSignaling Technology |
clone 42H3, RRID:AB_2197984 |
| Rabbit monoclonal STAT2 (WB, 1:1,000) |
CellSignaling Technology |
clone D9J7L, RRID:AB_2799824 |
| Rabbit monoclonal TBK1 (WB, 1:1,000) |
CellSignaling Technology |
clone D1B4, RRID:AB_2255663 |
| Rabbit polyclonal MAVS (WB, 1:1,000) |
ENZO Life Science |
Cat. #ALX‐210‐929‐C100, RRID:AB_2050916 |
| Rabbit polyclonal VZV ORF9 (WB, 1:2,000) |
Gift from Catherine Sadzot (University of Liege, Belgium) (Riva et al, 2013) |
N/A |
|
Oligonucleotides and sequence‐based reagents
|
| VZV ORF library cloning PCR primers |
This study |
Appendix Table S1
|
| Further cloning PCR primer |
This study |
Appendix Table S2
|
| RT‐qPCR primers |
This study |
Appendix Table S3
|
| VACV70mer F 5'‐ccatcagaaagaggtttaatatttttgtgagaccatcgaagagagaaagagataaaacttttttacgact‐3' |
This study. Sequence described previously (Unterholzner et al, 2010) |
N/A |
| VACV70mer R 5'‐agtcgtaaaaaagttttatctctttctctcttcgatggtctcacaaaaa‐tattaaacctctttctgatgg‐3' |
This study. Sequence described previously (Unterholzner et al, 2010) |
N/A |
| 100 bp ISD F 5'‐ACATCTAGTACATGTCTAGTCAGTATCTAGTGATTATCTAGACATACATCTAGTACATGTCTAGTCAGTATCTAGTGATTATCTAGACATGGACTCATCC‐3' |
This study. Sequence described previously (Zhou et al, 2021) |
N/A |
| 100 bp ISD R 5'‐GGATGAGTCCATGTCTAGATAATCACTAGATACTGACTAGACATGTACTAGATGTATGTCTAGATAATCACTAGATACTGACTAGACATGTACTAGATGT‐3' |
This study. Sequence described previously (Zhou et al, 2021) |
N/A |
|
Chemicals, enzymes and other reagents
|
| AlexaFluor‐488 (AF488) carboxylic acid (succinimidyl ester) |
Thermo Fisher |
Cat. #A20000 |
| Antibody FITC Labeling Kit |
abcam |
Cat. #ab288100 |
| BL21‐pLysS‐Rosetta |
Novagene |
Cat. #70954‐3 |
| BL21‐RIL DE3 E. coli
|
Agilent |
Cat. #230240 |
| Blasticidin |
gibco |
Cat. #A1113903 |
| CellTrace Yellow |
Invitrogen |
Cat. #C34567
|
| DAPI |
Invitrogen |
Cat. #D1306 |
| diABZi |
Cambridge Bioscience |
Cat #28054‐500 ug‐CAY |
| Dual Luciferase assay system |
Promega |
Cat. #E1910 |
| Dynabeads Protein G |
Invitrogen |
Cat. #10004D |
|
E. coli DNA |
Invivogen |
Cat. #tlrl‐ecdna |
| EZBlue Gel Staining Reagent |
Sigma Aldrich |
Cat. #G1041‐500ML |
| Gateway LR Clonase II Enzyme mix |
Invitrogen |
Cat. #11791020 |
| Lipofectamine 2000 |
Invitrogen |
Cat. #11668019 |
| Lipofectamine LTX |
Invitrogen |
Cat. #15338100 |
| LIVE/DEAD Fixable Violet Dead Cell Stain |
Invitrogen |
Cat. #L34955
|
| Normal goat serum |
Invitrogen |
Cat. #10000C |
| oligo‐dT primers |
Invitrogen |
Cat. #18418012 |
| PMA |
Sigma Aldrich |
Cat. #P1585‐1MG |
| Polybrene |
Sigma Aldrich |
Cat. #TR‐1003‐G |
| PreScission Protease |
GE Healthcare |
Cat. #GE27‐0843‐01 |
| Protease Inhibitor Cocktail |
CellSignaling Technology |
Cat. #5871 |
| Puyomycin |
gibco |
Cat. #A1113803 |
| QuantiLuc substrate |
Invivogen |
Cat. #rep‐qlc1 |
| SuperScript IV Reverse Transcriptase |
Invitrogen |
Cat. #18090050 |
| SYBR GreenER master mix |
Invitrogen |
Cat. #11762100 |
| TaqMan Universal PCR Master Mix |
Invitrogen |
Cat. #4304437 |
| Trimethoprim |
Sigma Aldrich |
Cat. #46984‐250MG |
| α32P‐ATP |
Perkin Elmer |
Cat. #NEG003X250UC |
|
Software
|
| Web‐based iBright Image Analysis software |
Thermo Fisher |
|
| FlowJo |
FlowJo, LLC |
|
| SnapGene |
GSL Biotech |
|
| ApE |
M. Wayne Davis, The University of Utah |
|
| Fiji 2.0.0 |
Schindelin et al (2012) |
|