Table 3.
Functional enrichment analysis of mRNAs in the ceRNA network in SCLC.
| ID | Description | Ontology | Bg Ratio | p value | Adjusted p | Genes symbol* | Count |
|---|---|---|---|---|---|---|---|
| GO:0043312 | neutrophil degranulation | BP | 485/18670 | 1.843E-06 | 9.114E-04 | CFD/FCN1/FGR/GAA/ITGAL/ITGAX/ITGB2/TCIRG1/CD93/NFAM1 | 10 |
| GO:0002283 | neutrophil activation involved in immune response | BP | 488/18670 | 1.948E-06 | 9.114E-04 | CFD/FCN1/FGR/GAA/ITGAL/ITGAX/ITGB2/TCIRG1/CD93/NFAM1 | 10 |
| GO:0042119 | neutrophil activation | BP | 498/18670 | 2.336E-06 | 9.114E-04 | CFD/FCN1/FGR/GAA/ITGAL/ITGAX/ITGB2/TCIRG1/CD93/NFAM1 | 10 |
| GO:0002446 | neutrophil-mediated immunity | BP | 499/18670 | 2.378E-06 | 9.114E-04 | CFD/FCN1/FGR/GAA/ITGAL/ITGAX/ITGB2/TCIRG1/CD93/NFAM1 | 10 |
| GO:0007229 | integrin-mediated signalling pathway | BP | 103/18670 | 1.545E-05 | 4.738E-03 | FGR/ITGAL/ITGAX/ITGB2/ADAM15 | 5 |
| GO:0050663 | cytokine secretion | BP | 240/18670 | 8.892E-05 | 2.272E-02 | FCN1/FGR/NOTCH1/TCIRG1/CD244/NLRP12 | 6 |
| GO:0030198 | extracellular matrix organization | BP | 368/18670 | 1.237E-04 | 2.467E-02 | ITGAL/ITGAX/ITGB2/NOTCH1/ADAM15/GREM1/ADAMTSL4 | 7 |
| GO:0050900 | leukocyte migration | BP | 499/18670 | 1.287E-04 | 2.467E-02 | CSF3R/ITGAL/ITGAX/ITGB2/GREM1/CD244/MYO1G/NLRP12 | 8 |
| GO:0043062 | extracellular structure organization | BP | 422/18670 | 2.861E-04 | 4.873E-02 | ITGAL/ITGAX/ITGB2/NOTCH1/ADAM15/GREM1/ADAMTSL4 | 7 |
| GO:0101003 | ficolin-1-rich granule membrane | CC | 61/19717 | 8.873E-07 | 6.558E-05 | GAA/ITGAX/ITGB2/TCIRG1/CD93 | 5 |
| GO:0101002 | ficolin-1-rich granule | CC | 185/19717 | 1.017E-06 | 6.558E-05 | CFD/FCN1/GAA/ITGAX/ITGB2/TCIRG1/CD93 | 7 |
| GO:0030667 | secretory granule membrane | CC | 298/19717 | 2.154E-06 | 9.263E-05 | APLP2/GAA/ITGAL/ITGAX/ITGB2/TCIRG1/CD93/NFAM1 | 8 |
| GO:0070821 | tertiary granule membrane | CC | 73/19717 | 5.888E-05 | 1.899E-03 | GAA/ITGAX/ITGB2/CD93 | 4 |
| GO:0008305 | integrin complex | CC | 31/19717 | 9.721E-05 | 2.370E-03 | ITGAL/ITGAX/ITGB2 | 3 |
| GO:0070820 | tertiary granule | CC | 164/19717 | 1.106E-04 | 2.370E-03 | GAA/ITGAX/ITGB2/TCIRG1/CD93 | 5 |
| GO:0098636 | protein complex involved in cell adhesion | CC | 34/19717 | 1.286E-04 | 2.370E-03 | ITGAL/ITGAX/ITGB2 | 3 |
| GO:0005774 | vascular membrane | CC | 412/19717 | 1.184E-03 | 1.910E-02 | ABCA2/GAA/TCIRG1/AHNAK/ATG16L2/NFAM1 | 6 |
| GO:0031256 | leading edge membrane | CC | 170/19717 | 1.476E-03 | 1.988E-02 | FGR/PSD4/MYO1G/FGD2 | 4 |
| GO:0001726 | Ruffle | CC | 172/19717 | 1.541E-03 | 1.988E-02 | FGR/MEFV/PSD4/FGD2 | 4 |
| GO:0035579 | specific granule membrane | CC | 91/19717 | 2.324E-03 | 2.725E-02 | ITGAL/ITGB2/CD93 | 3 |
| GO:0032587 | ruffle membrane | CC | 94/19717 | 2.549E-03 | 2.740E-02 | FGR/PSD4/FGD2 | 3 |
| GO:0005765 | lysosomal membrane | CC | 354/19717 | 3.536E-03 | 3.297E-02 | ABCA2/GAA/TCIRG1/AHNAK/NFAM1 | 5 |
| GO:0098852 | lytic vacuole membrane | CC | 355/19717 | 3.578E-03 | 3.297E-02 | ABCA2/GAA/TCIRG1/AHNAK/NFAM1 | 5 |
GO, gene ontology; BP, biological process; CC, cellular component; KEGG, Kyoto Encyclopaedia of Genes and Genomes; ceRNA, competing endogenous RNA; circRNA, circular RNAs; lncRNA, long noncoding RNA; miRNA, microRNA; mRNA, messenger RNA; SCLC, small cell lung cancer; Bg, background. *The full name of gene symbols is available in Table 2 .