Table 1.
Differential expressions in IBS-D compared with IBS-C of the same genes that were upregulated in both right and left colonic mucosa
| Right Colon |
Left Colon |
|||||
|---|---|---|---|---|---|---|
| Mucosal Function | Gene Symbol | Gene function | Log2-fold change | P adj | Log2-fold change | P adj |
| Inflammation or immune function | ||||||
| Lymphocyte development | CD19 | B cell development | 1.021 | 0.008 | 1.137 | 6.70E-05 |
| IKZF3 | Lymphocyte differentiation | 1.411 | 9.87E-06 | 1.414 | 2.17E-08 | |
| CXCR5 | Lymphocyte differentiation | 1.479 | 0.006 | 1.185 | 0.003 | |
| B or T lymphocyte function and differentiation | CD79B | B lymphocyte receptor | 1.078 | 0.002 | 1.107 | 2.33E-05 |
| CD22 | B lymphocyte inhibition | 1.533 | 0.0001 | 1.465 | 9.13E-07 | |
| CHI3L2 | Stimulation of type 2 T helper lymphocytes | 1.237 | 0.005 | 1.176 | 0.0003 | |
| CR2 | Participates in B lymphocyte activation | 1.624 | 0.002 | 1.697 | 3.54E-05 | |
| BANK1 | B lymphocyte function | 1.112 | 0.002 | 1.109 | 0.0002 | |
| FCRL3 | Fc receptor-like genes expressed in B lymphocytes | 1.535 | 0.0004 | 1.349 | 0.0001 | |
| FCRL1 | 1.415 | 0.01 | 2.005 | 6.25E-07 | ||
| MS4A1 (CD20) | Differentiation of B-cell to plasma cell | 1.514 | 0.006 | 1.288 | 0.006 | |
| Chemokines and immune activation | CCL23 | Chemokine | 1.739 | 2.52E-05 | 1.176 | 0.001 |
| CXCL13 | Chemokine | 1.742 | 0.006 | 1.368 | 0.0143 | |
| CTLA4 | Immune checkpoint | 1.486 | 0.0001 | 1.039 | 0.010 | |
| PILRB | Immune activation | 1.201 | 0.0001 | 1.645 | 1.53E-06 | |
| MAP3K14 | NFκB-inducing kinase | 1.011 | 1.79E-06 | 1.005 | 5.6E-08 | |
| TCL1A | Associated with NFκB | 2.024 | 0.002 | 1.752 | 0.002 | |
| TLR10 | Pathogen recognition | 1.103 | 0.006 | 1.343 | 1.39E-05 | |
| TNFSF11 | Encodes a member of the TNF cytokine family | 1.312 | 0.007 | 1.170 | 0.0002 | |
| Receptors and ion channels | ||||||
| P2RX5 | Purinoceptors for ATP | 1.284 | 0.0002 | 1.433 | 9.33E-08 | |
| CNR2 | Cannabinoid receptor 2 | 1.064 | 0.009 | 1.096 | 0.0002 | |
| GABRE | GABA-A receptor subunit epsilon | 1.244 | 0.0002 | 1.105 | 0.002 | |
| RNF207 | Expression of K+ channel KCNH2 | 1.254 | 0.0003 | 1.099 | 0.001 | |
| Visceral hypersensitivity | ||||||
| TRPV1 | TRPV1 channel: nociception | 1.384 | 0.0002 | 1.373 | 2.41E-06 | |
| Miscellaneous | ||||||
| DNHD1 | Aka C11orf47: microtubule motor activity | 1.154 | 0.0006 | 1.047 | 0.0001 | |
| COL27A1 | Fibrillar collagens | 1.261 | 0.0003 | 1.241 | 0.00001 | |
IBS, irritable bowel syndrome.