Table 3.
Type of cancer | Biomarkers | Target molecule | Method | Formalin fixatives | Fixation time |
---|---|---|---|---|---|
Breast cancer | HER2 | Protein | IHC | 10% NBF |
6–72 h <6 h should be avoided |
HER2 | DNA | ISH | |||
ER/PgR | Protein | IHC | |||
Non‐small cell lung cancer | EGFR | DNA | Real‐time PCR | 10% NBF | 6–48 h |
ALK | Protein | IHC | |||
ALK | DNA | FISH | |||
ROS1 | RNA | RT real‐time PCR | 10% NBF |
For surgical specimens, 18–36 h For biopsy specimens, 4–24 h |
|
PD‐L1 | Protein | IHC | 10% NBF | 6–48 h | |
Gastric cancer | HER2 | Protein | IHC | 10% NBF | 6–48 h |
HER2 | DNA | ISH | |||
Colorectal cancer |
RAS (KRAS/NRAS) |
DNA | PCR‐rSSO | 10% NBF | 6–48 h |
Malignant melanoma | BRAF | DNA | Real‐time PCR | – | – |
Note: –, not described.
Abbreviations: CDx, companion diagnostics; IHC, immunohistochemistry; ISH, in situ hybridization; 10% NBF, 10% neutral buffered formalin.