| Chemicals, peptides, and recombinant proteins |
|
| DMEM |
Thermo Fisher Scientific |
Cat# 11960044 |
| Iscove’s Modified Dulbecco’s Medium (IMDM) |
Sigma-Aldrich |
Cat# I3390 |
| Opti-MEM™ I Reduced Serum Medium |
Life Technologies |
Cat# 31985062 |
| Fetal Bovine Serum (FBS) |
Peak Serum |
Cat# PS-FB3 |
| L-Glutamine-200 mM (100×) |
Thermo Fisher Scientific |
Cat# 250-30-081 |
| β-mercaptoethanol |
Thermo Fisher Scientific |
Cat# 21985023 |
| Gentamycin |
Sigma-Aldrich |
Cat# G1272 |
| Penicillin-streptomycin |
Thermo Fisher Scientific |
Cat# 10378016 |
| ACK Lysing Buffer |
Gibco |
Cat# A1049201 |
| PBS (1×) pH 7.4 |
Thermo Fisher Scientific |
Cat# 10010-049 |
| Polybrene Infection / Transfection Reagent |
Sigma-Aldrich |
Cat# TR-1003-G |
| TransIT®-293 Transfection Reagent |
Mirus |
Cat# MIR2700 |
| 0.05% Trypsin-EDTA (1×), phenol red |
Life Technologies |
Cat# 25300054 |
| Phorbol 12-myristate 13-acetate (PMA) |
Sigma-Aldrich |
Cat# P8139 |
| Ionomycin |
Sigma-Aldrich |
Cat# I0634 |
| GolgiSTOP |
BD |
Cat# 554724, RRID: AB_2869012
|
| Ampicillin |
Sigma-Aldrich |
Cat# A0166 |
| Luria Broth Base |
Invitrogen |
Cat# 12795-027 |
| LB Agar |
Invitrogen |
Cat# 22700-025 |
| 0.5 M EDTA |
Invitrogen |
Cat# AM9260G |
| LIVE/DEAD Fixable Aqua Dead Cell Stain Kit, 405 nm (Dilution 1:500) |
Thermo Fisher Scientific |
Cat# L34957
|
| Recombinant Human TGF-beta 1 Protein |
R&D |
Cat# 240-B |
| Recombinant Mouse IL-6 Protein |
R&D |
Cat# 406-ML |
| Recombinant Mouse IL-1β Protein |
R&D |
Cat# 401-ML |
|
| Critical commercial assays |
|
| PureLink® HiPure Plasmid Midiprep Kit |
Life Technologies |
Cat# K210005 |
| Naive CD4+ T Cell Isolation Kit, mouse |
Miltenyi Biotec |
Cat# 130-104-453 |
| eBioscience™ Foxp3 / Transcription Factor Staining Buffer Set |
Thermo Fisher Scientific |
Cat# 00-5523-00 |
|
| Cell lines and bacteria strain |
|
| Human: Plat-E Retroviral Packaging Cell Line |
Cell Biolabs, Inc. |
Cat# RV-101 |
| DH5α E. coli
|
Biomiga |
Cat# CC1101-01 |
|
| Experimental models: Organisms/strains |
|
| C57BL/6 RORγtWT and RORγtS182A mice (gender-matched 8–12-week-old littermates) |
Ma et al., (2022) |
N/A |
|
| Recombinant DNA |
|
| MSCV-IRES-NGFR (NGFR) |
Addgene |
RRID: Addgene_27489 |
| MSCV-IRES-Thy1.1 (Thy1.1) |
Addgene |
RRID: Addgene_17442 |
|
| Antibodies |
|
| Rabbit IgG Fraction to Hamster IgG (Whole Molecule) Antibody (Dilution 1:20) |
MP Bio |
Cat# 0855398, RRID: AB_2334935
|
| PE anti-human CD271 (NGFR) Antibody (Clone ME20.4) (Dilution 1:400) |
BioLegend |
Cat# 345106, RRID: AB_2152647
|
| Pacific Blue™ anti-rat CD90/mouse CD90.1 (Thy-1.1) Antibody (clone OX-7) (Dilution 1:400) |
BioLegend |
Cat# 202521, RRID: AB_1595584
|
| APC/Cyanine7 anti-mouse IL-17A Antibody (clone TC11-18H10.1) (Dilution 1:100) |
BioLegend |
Cat# 506939; RRID: AB_2565780
|
| PE/Cyanine5 anti-mouse CD4 Antibody (clone GK1.5) (Dilution 1:400) |
BioLegend |
Cat# 100410; RRID: AB_312695
|
| CD3ε Monoclonal Antibody (clone 145-2C11), Functional Grade (Dilution 1:1000) |
Thermo Fisher Scientific |
Cat# 16-0031-86, RRID: AB_468849
|
| CD28 Monoclonal Antibody (clone 37.51), Functional Grade (Dilution 1:4000) |
Thermo Fisher Scientific |
Cat# 16-0281-86, RRID: AB_468923
|
| ROR gamma (t) Monoclonal Antibody (clone B2D), PE-eFluor 610 (Dilution 1:200) |
Thermo Fisher Scientific |
Cat# 61-6981-82; RRID: AB_2574650
|
| IL-10 Monoclonal Antibody (clone JES5-16E3), Alexa Fluor 488 (Dilution 1:100) |
Thermo Fisher Scientific |
Cat# 53-7101-80; RRID: AB_469925
|
| IL-10 Monoclonal Antibody (clone JES5-16E3), Alexa Fluor 700 (Dilution 1:100) |
Thermo Fisher Scientific |
Cat# 56-7101-80; RRID: AB_891570
|
| FOXP3 Monoclonal Antibody (clone FJK-16s), PE-Cyanine5.5 (Dilution 1:200) |
Thermo Fisher Scientific |
Cat# 35-5773-82; RRID: AB_11218094
|
| ChromPure Rat IgG (Dilution 1:50) |
Jackson ImmunoResearch |
Cat# 012-000-013; RRID: AB_2337136
|
|
| Software and algorithms |
|
| FlowJo™ v10.8 |
BD |
https://www.flowjo.com/ |
|
| Other |
|
| Biological Safety Cabinet |
Thermo Fisher Scientific |
1384-M |
| Centrifuge |
Eppendorf |
5810R |
| NanoDrop Lite |
Thermo Fisher Scientific |
BZB8917251 |
| ZE5 Cell Analyzer |
Bio-Rad |
12004278 |
| 15 mL Conical tubes |
Corning |
Cat# 188261 |
| 50 mL Conical tubes |
Corning |
Cat# 227270 |
| 24-well tissue culture plate |
Fisher Scientific |
Cat# 353047 |
| 6-well tissue culture plate |
Eppendorf |
Cat# 30720113 |
| 10 mL serological pipettes |
Genesee Scientific |
Cat# 12-112 |
| 5 mL serological pipettes |
Genesee Scientific |
Cat# 12-110 |
| 3 mL syringe |
Fisher Scientific |
Cat# 14823436 |
| Millex-HV Syringe Filter Unit, 0.45 μm |
Fisher Scientific |
Cat# SLHV033RS |
| 40 μm cell strainer |
Falcon |
Cat# 352340 |
| Curved forceps |
Denville |
Cat# S728685 |
| Delicate tip straight forceps |
Denville |
Cat# S728696 |
| Micro dissecting scissors 3.5″ |
Roboz Surgical Store |
Cat# RS-5910 |
| Vi-Cell cell counter |
Beckman Coulter |
AZ41595 |