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. Author manuscript; available in PMC: 2022 Jul 19.
Published in final edited form as: Cell Rep. 2022 Jul 5;40(1):111008. doi: 10.1016/j.celrep.2022.111008

Figure 1. Microbiota diversity and cyclical pattern at the ileum.

Figure 1.

(A) Schematic representation of study design and sample collection.

(B) Shared ASVs between conditions.

(C) Measures of α-diversity within each sample based on phylogenetic distance (Faith’s PD).

(D) Overall β-diversity across conditions time points.

(E) Principal coordinate analysis (PCoA) of ASVs colored by condition and collection time.

(F) Cycling (JTK_CYCLE algorithm, MetaCycle) based on the total number of ASVs or reads.

(G) Differential ranking between conditions as determined by Songbird. Statistical significance was assessed with the Mann-Whitney U test. *p < 0.05; **p < 0.01; ***p < 0.001; n.s., not significant. Three mice per time point were used for each condition, for a total of NA (n = 18), FA (n = 18), FT (n = 18).