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. 2001 Jul;67(7):2942–2951. doi: 10.1128/AEM.67.7.2942-2951.2001

TABLE 1.

Oligonucleotide sequences used in this study

Primer Sequence (5′ to 3′) Saccharomyces cerevisiae positions Specificity Reference
Set Aa
 Euk1A CTGGTTGATCCTGCCAG 4 to 20 Eukarya 48
 Euk516r-GCb ACCAGACTTGCCCTCC 563 to 548 Eukarya 2
Set B
 Euk1209f-GCc CAGGTCTGTGATGCCC 1423 to 1438 Eukarya 14
 Uni1392r ACGGGCGGTGTGTRC 1641 to 1627 Universal 22
Set C
 EukA AACCTGGTTGATCCTGCCAGT 1 to 21 Eukarya 33
 EukB TGATCCTTCTGCAGGTTCACCTAC 1795 to 1772 Eukarya 33
a

Set A was also used for T-RFLP analysis, using hexachlorofluorescein-labeled Euk1A and Euk516r without the GC clamp. 

b

The GC clamp sequence is CGCCCGGGGCGCGCCCCGGGCGGGGCGGGGGCACGGGGGG. 

c

The GC clamp sequence is CGCGCGCCGCGCCCCGCGCCCGTCCCGCCGCCCCCGCCCG.