Abstract
Increasing soil salinization largely impacts crop yield worldwide. To deal with salinity stress, plants exhibit an array of responses, including root system architecture remodelling. Here, we review recent progress in physiological, developmental and cellular mechanisms of root growth responses to salinity. Most recent research in modulation of root branching, root tropisms, as well as in root cell wall modifications under salinity stress, is discussed in the context of the contribution of these responses to overall plant performance. We highlight the power of natural variation approaches revealing novel potential pathways responsible for differences in root salt stress responses. Together, these new findings promote our understanding of how salt shapes the root phenotype, which may provide potential avenues for engineering crops with better yield and survival in saline soils.
Keywords: development, genome‐wide association studies (GWAS), gravitropism, growth, salinity
Short abstract
This review highlights recent research on the effect of soil salinity on root growth modulation. We discuss root architecture plasticity, root tropisms and root cell wall modifications under salinity stress in Arabidopsis thaliana and several crop species.
1. INTRODUCTION
Increased soil salinity is a worldwide problem that causes yield loss of crops. Due to the current rising sodium chloride levels in groundwater, secondary salinization affects irrigated land, eventually leading to the loss of agricultural soils (FAO, 2015). Unlike halophyte species that are highly tolerant to salt concentrations (at least 200 mM NaCl), glycophyte plant species, that include most of our crops, can only grow healthily in low concentrations of salt (Cheeseman, 2015; Flowers & Colmer, 2008). Thus, research efforts aim to find physiological and genetic solutions to minimize the impact of saline land on global crop yield (Ismail & Horie, 2017; Munns et al., 2020; Munns & Gilliham, 2015). Salt stress is defined as the detrimental effect of high concentrations of salt accumulated in the soil, leading to inhibition of plant growth and development (Rahman, Ijaz, Qamar, Bukhari, & Malik, 2018). In saline soils, plants experience both osmotic and ionic stress. Osmotic stress arises due to the increased sodium ions in the soil, which leads to the reduction of water absorption, affecting various downstream processes in plants within several hours (Awlia, Alshareef, Saber, et al., 2021; Julkowska & Testerink, 2015). The ionic stress component was believed to affect plants much later after perception of the Na+ stimulus; when toxic NaCl levels were reached in the root and shoot tissues (Munns & Tester, 2008). However, recent studies show that plants can generate rapid ionic stress‐specific Ca2+ signals within 30 s (Choi, Toyota, Kim, Hilleary, & Gilroy, 2014; Jiang et al., 2019) and show internalization of PIN2 auxin transporters within an hour as a specific response to Na+ ions (Galvan‐Ampudia et al., 2013). Cellular signal transduction pathways induced upon salinity include calcium and cyclic guanosine monophosphate signalling, phospholipid signalling and reactive oxygen species (ROS) formation as well as protein kinase activation (Lamers, van Meer, & Testerink, 2020; van Zelm, Zhang, & Testerink, 2020). Moreover, cellular Na+/K+ balance modulated via ion transporters such as potassium channels and (anti‐) transporters also contribute to plant local and distal salt responses (van Zelm et al., 2020; Y. Yang & Guo, 2018). Together, these cellular processes affect plant growth and survival in salt.
Roots are able to sense multiple environmental stimuli, coordinate cellular stress responses and reorient their growth direction as reviewed (Lamers et al., 2020; Muthert, Izzo, van Zanten, & Aronne, 2020). Root growth strategies are dynamically changed in response to biotic and abiotic stresses, by modulation of specific key traits, such as root length and branching, redirection of root growth and modification of cell wall compositions. In salinized conditions, plants exhibit root phenotypic plasticity by modulating both root system architecture (RSA) components and directional growth dynamically (Dinneny, 2019; Julkowska et al., 2017; Korver et al., 2020). Understanding these dynamic root growth strategies and their underlying physiological, developmental and cellular mechanisms is expected to contribute to future agricultural strategies to improve crop yield in saline soils.
This review provides an overview of root architectural plasticity in responses to salinity stress and links new findings on mechanisms to phenotypes. We firstly discuss the basics of root phenotypes under default conditions without salt, and then compare to salinity conditions focusing on the physiological responses, root developmental growth, genetic and natural variation approaches and cell wall modulation.
2. RSA REMODELING STRATEGIES TO COPE WITH SALINITY
2.1. RSA: basic strategies to shape the root
The soil environment is variable and complex, thus to grow in soil, the development of roots needs to be flexible in response to many cues (Koevoets, Venema, Elzenga, & Testerink, 2016; Rellán‐Álvarez, Lobet, & Dinneny, 2016). The RSA of a plant describes the spatial configuration of the whole root system, that exhibits a considerable diversity among species, genotypes, space and time (Lynch, 1995). Monocotyledons and dicotyledons show fundamentally distinct patterns in RSA, as reviewed (Osmont, Sibout, & Hardtke, 2007). In general, RSA, as a plastic trait, presents the root 3D developmental plasticity that is established to avoid unfavourable environments and optimize the utilization of resources (Morris et al., 2017). One of the limitations is the difficulty in visualizing the root systems in natural soil situations because they are hidden underground. Recently, with the progress in technological development and mathematical concept applications, more visualization technologies become available, including the X‐ray computed tomography (CT), Growth and Luminescence Observatory for Roots (GLO‐Roots), soil rhizotron phenotyping and computational analysis approaches (Atkinson, Pound, Bennett, & Wells, 2019; Gandullo, Ahmad, Darwish, Karlova, & Testerink, 2021; Pagès, Pointurier, Moreau, Voisin, & Colbach, 2020; Rellán‐Álvarez et al., 2015; Teramoto et al., 2020; Yoshino et al., 2019). Yet, currently most of our knowledge on RSA plasticity and the genetic factors that control it, is still based on 2D systems, in particular of roots growing on agar media in vertical plates.
2.2. Salt modulates RSA
Plants exhibit notable changes in RSA in response to salt. The effect of salt treatment on root growth is largely dependent on the severity of the salt treatment. In wheat, salt inhibits root length in a dose‐dependent manner ranging from 50 to 200 mM NaCl (Rahnama, Munns, Poustini, & Watt, 2011). In Arabidopsis, moderate to high salt concentrations (75–150 mM NaCl) inhibit both primary root (PR) and lateral root (LR) growth (Figure 1). The traits of PR length, LR length and LR number are consistently reduced, but LR density shows a large variation in response to high salt concentrations between different reports, likely caused by different nutrient concentrations used (Julkowska et al., 2014; P. Li, Yang, et al., 2021; Y. Zhao, Wang, Zhang, & Li, 2011; Zolla, Heimer, & Barak, 2010). Under even higher salt concentrations (NaCl ≥ 200 mM), the emerging and young LRs (<100 μm) exhibit dramatically less damage, as compared with the PR and elongated LRs (> 400 μm) in viability assays (Ambastha, Friedmann, & Leshem, 2020). The difference observed could be due to the higher level of NADPH oxidase‐activated ROS induction in the young LR as compared to the PR (Ambastha et al., 2020). On the other hand, the relevance of these observations remains to be established, as they occur on a salt concentration that is lethal to the plants. Interestingly, low salt concentrations (<NaCl 50 mM) promote LR growth when 4 days or 5 days‐old seedlings are transferred to the NaCl stress medium (Julkowska et al., 2014; Zolla et al., 2010). Additionally, this effect was shown to be specific to salt stress, and did not occur in response to osmotic stress (Zolla et al., 2010). When seeds are germinated directly on the low‐stress medium of 30 mM NaCl, no difference in LR development was found (Y. Zhao et al., 2011), suggesting that the developmental stage is a crucial factor for the plant to activate different root responses to salinity via various molecular, cellular and physiological mechanisms. However, the mechanisms underlying the dynamic modulation of RSA during the different stages of plant development are still largely unclear.
Figure 1.

Root system architecture (RSA) remodelling in response to salt treatment. Salt modulates root shape through PR, LR and root hairs. Salt affects PR and root hair development by reducing both number and length, and specifically induces changes in PR growth angle in a halotropism assay. Natural variation approaches have led to the identification of several new genetic loci contributing to RSA changes in salt. The transcription factor WRKY DNA‐BINDING PROTEIN 25 (WRKY25), cation‐proton exchanger (CHX13) and Double Bending 1 (DOB1) were identified to be required for the salt avoidance (halotropism) response (Deolu‐Ajayi et al., 2019); High‐affinity K + transporter 1 (HKT1) and CYTOCHROME P450 FAMILY 79 SUBFAMILY B2 (CYP79B2) were identified to be involved in LRs development under salt stress (Julkowska et al., 2017) [Colour figure can be viewed at wileyonlinelibrary.com]
Abscisic acid (ABA), as a general stress‐induced hormone, has a crucial role in regulating the plant growth response under saline conditions as reviewed (B. Li, Tester, & Gilliham, 2017; van Zelm et al., 2020). Salt stress induces a quiescent phase in LR outgrowth, which is mediated by the action of the ABA (L. Duan et al., 2013). Mutants of ABA‐independent class I SnRK2 members showed a reduction in PR length and LR density (Kawa et al., 2020; McLoughlin et al., 2012). How ABA‐dependent and ABA‐independent pathways together contribute to the effect of moderate (at least sub‐lethal) salt stress in modulating RSA at different developmental stages would be an interesting topic to be further investigated.
Root hairs are cylindrical extensions of epidermal cells that are an important aspect of RSA, contributing to water and nutrient uptake by increasing the absorptive surface area of the root (Correa, Postma, Watt, & Wojciechowski, 2019). Root hairs also enhance plant survival by promoting the root anchoring and water preservation capacity in soil, due to their tensile strength (Bengough Glyn, Loades, & McKenzie, 2016; Choi & Cho, 2019; C. Zhang et al., 2018). Multiple key genes have been reported to be involved in the developmental program of root hairs from initiation to outgrowth, including gene families of root hair defective and root hair defective six‐like (Han et al., 2020; Salazar‐Henao, Vélez‐Bermúdez, & Schmidt, 2016; Stanislas & Jaillais, 2019). When exposed to salt, the number of root hairs is dramatically reduced, which could be partially attributed to the large decrease in epidermal cell numbers under salt stress (Dinneny, Long, Wang, et al., 2008; Y. Wang et al., 2008). Notably, ionic stresses (NaCl, KCl or LiCl) could reduce both root hair density and elongation, while an equi‐osmolar concentration of mannitol increased both root hair density and elongation, indicating different mechanisms in regulating root hair growth between ionic and osmotic stresses (Y. Wang et al., 2008). In response to salt treatment, both cell autonomous and non‐autonomous effects were observed by transcriptional profiling of three root hair epidermal patterning mutants. Among the identified salt‐responsive genes, many of these genes repressed by salt were involved in cell wall structure and trichoblast differentiation (Dinneny et al., 2008). Interestingly, salt inhibited the root hair outgrowth immediately after the treatment but then resumed after 8 hr, indicating the root hair responses are dynamic (Dinneny et al., 2008). However, current knowledge is still very limited on root hair developmental regulation and its contribution to salt stress responses.
3. ROOT TROPISMS DURING SALINITY STRESS: HOW TO GROW DOWN AND HOW TO AVOID SALT
Plant roots are capable to reorient their growth direction towards or away from specific stimuli, exhibiting gravitropism (Morita & Tasaka, 2004; Su, Gibbs, Jancewicz, & Masson, 2017), halotropism (Galvan‐Ampudia et al., 2013; Korver et al., 2020), hydrotropism (Dietrich et al., 2017; Eapen, Barroso, Ponce, Campos, & Cassab, 2005), phototropism (Kimura et al., 2018; Silva‐Navas et al., 2016), chemotropism (Ferrieri et al., 2017; Kellermeier et al., 2014) and thigmotropism (Massa & Gilroy, 2003). Under normal and mildly saline conditions, gravitropism plays an overwhelming and continuous role in modulating root growth direction. The plant hormone auxin mediates both gravity sensing and subsequent responses (Y. Zhang, He, et al., 2019). After gravitropic signal integration, auxin is transported and accumulated at the lower side of the root elongation zone of a horizontally placed root, where it rapidly inhibits root cell elongation (Abas et al., 2006; Brunoud et al., 2012; Fendrych et al., 2014; Fendrych, Leung, & Friml, 2016). Auxin redistribution largely depends on the auxin importers AUXIN/LIKE‐AUX1 (AUX/LAX) and the PIN‐FORMED (PIN) family of auxin efflux carriers, namely PIN1, PIN2, PIN3, PIN4 and PIN7‐work together to establish a root “auxin reflux loop” as summarized in reviews (Adamowski & Friml, 2015; Korver, Koevoets, & Testerink, 2018; Zhou & Luo, 2018).
Under high salinity, plants can reduce their exposure to salinity by changing their roots' growth direction to avoid a saline environment through a response called halotropism. Not only the roots of Arabidopsis, but also the roots of tomato (Solanum lycopersicum) and sorghum (Sorghum bicolor) seedlings, either on agar media or in soil, are able to exhibit a halotropic response when exposed to a salt gradient (Galvan‐Ampudia et al., 2013). Halotropism is accomplished by redistribution of auxin in the root tip mainly by the PIN2 auxin efflux carrier. When exposed to a salt gradient, salt triggers internalization of PIN2 at the saltier side of the root, consequently leading to auxin redistribution and the directional bending away from salt (Galvan‐Ampudia et al., 2013). In addition, other auxin transporters are also relevant to halotropism. For example, a recent study showed that salt induces the transient upregulation of PIN1 in the stele, and an elevation of AUX1 levels on the non‐salt‐exposed side (van den Berg, Korver, Testerink, & ten Tusscher, 2016). In accordance, pin1 mutants show a delayed halotropic response, demonstrating a role for PIN1 in halotropism (van den Berg et al., 2016; Figure 2).
Figure 2.

Root cellular responses to salt. (a) Roots find the balance between tropisms to avoid salt. The directional growth depends on the dynamic auxin reflux loop with the involvement of the auxin importer AUX1 and the PIN‐FORMED (PIN) family. Root growth follows the gravity vector under normal conditions, while under salt conditions, roots exhibit a salt avoidance response by redistribution of auxin in the root tip, which is dependent on the ζ‐type PLDs (PLDζ1 and PLDζ2) that mediate the re‐localization of PIN2. Only the changed PINs were shown for salt treatment. (b) Cell wall modulations under salt treatment. Salt induces cell wall composition changes, including the increased deposition of lignin and suberin. In Arabidopsis, salt‐induced lignification and suberization mainly occur at the root endodermal layer, as exodermis does not exist in Arabidopsis roots; while in other species (rice and maize), it occurs at both endodermal and exodermal root layers. Biosynthesis of arabinose, galactan, lignin and suberin, can contribute to plant salt tolerance. Cartoon of root tissue cells adapted with permission (Bouche, Frederic [2017]: Arabidopsis—Root cell types. Figshare. https://doi.org/10.6084/m9.figshare.4688752.v2.) [Colour figure can be viewed at wileyonlinelibrary.com]
Notably, it was shown that osmotic stresses (both NaCl and mannitol treatments), immediately enhance clathrin‐mediated endocytosis, increase PIN endocytosis and overcome the inhibitory effect of auxin (Baral et al., 2015; Nakayama et al., 2012; Zwiewka, Nodzyński, Robert, Vanneste, & Friml, 2015). Moreover, a recent study showed that both NaCl and sorbitol treatments induce large membrane structures at the plasma membrane in epidermal and LR cap cells (Korver et al., 2020). In response to both ionic and osmotic stresses, there is a crucial role for ζ‐type PLD (PLDζ1) that is required for the relocalization of auxin carrier PIN2, one of the major factors in halotropism (Korver et al., 2020). On the other hand, despite the overlap with osmotic responses, roots also seem to exhibit a NaCl‐specific cellular response as a NaCl gradient affected PIN2 subcellular localization in epidermal cells while mannitol did not affect PIN2 localization, and also the observed phenotypic response is specific to NaCl and not induced by KCl or osmotic stress (sorbitol or mannitol) gradients at equivalent concentrations (Deolu‐Ajayi et al., 2019; Galvan‐Ampudia et al., 2013). In accordance, the PIN2‐GFP signal on the lateral side of the membrane of epidermal cells was not affected by sorbitol in either Col‐0 or a pldζ1 mutant, but was induced by NaCl in Col‐0. This response was absent in the pldζ1 mutant, indicating that lateral PIN2 re‐localization is specific to salt and depends on PLDζ1 function (Korver et al., 2020; Figure 2). In comparison, hydrotropism, a response of roots toward water, often also assessed on sorbitol gradients, only manifests itself typically at much higher osmotic stress levels (Dietrich et al., 2017). Yet, how the observed cellular responses contribute to the salt‐specificity of the physiological halotropic response, remains to be elucidated.
Under saline conditions, gravitropic growth is attenuated by degradation of amyloplasts in root columella cells, which is correlated with PIN2 transcription level and leading to auxin distribution in salt stress (Sun et al., 2008). The inhibition of root gravitropic growth by salt is dose‐dependent (from 0 to 150 mM; Sun et al., 2008). In addition, on salt gradients, roots firstly display salt avoidance but eventually follow the gravitropic response at lower salt concentrations, while at high salt roots are able to overcome gravitropism and continue to exhibit halotropism (Galvan‐Ampudia et al., 2013), thus suggesting a quantitative decisive balancing act determined by the relative strength between these two tropisms. In addition, light has been suggested to play a role in mediating root halotropism. The turfgrass species rough bluegrass (Poa trivialis L.) exhibits enhanced halotropism in blue light compared with white light, while in the dark or red light rough bluegrass does not exbibit halotropism (Petrella et al., 2018). Therefore, it is indispensable to build up knowledge not only on single stimuli modulating tropisms, but also on tropism‐tropism interaction, and the mechanisms underlying the responses. In addition, while negative halotropism of glycophytes has been relatively well characterized, further investigations are still needed for a possible positive halotropic response of halophytes (Shelef, Lazarovitch, Rewald, Golan‐Goldhirsh, & Rachmilevitch, 2010). This may provide a better understanding on whether plants are capable of flexibly and dynamically governing the movement of their roots towards or away from salt, based on their preferred salt level.
4. UNCOVERING THE GENETIC CONTROL OF ROOT PLASTICITY
Natural variation studies have proven to be successful in identifying novel genetic components and uncovering relevant loci that are associated with agronomic traits. This approach relates phenotypic variation to genetic variation thereby statistically associating traits with sequence polymorphism in natural accessions (Alonso‐Blanco et al., 2016; Seren et al., 2013). Several novel root growth regulation factors identified via genome wide association studies (GWAS) were reported to be associated with RSA traits in both default (without salt) and saline conditions. In Arabidopsis, Cytokinin oxidase 2 (CKX2) was identified to be associated with a gravitropic setpoint angle of LRs. CKX2 affects LR directional growth and cellular elongation by controlling the metabolism of cytokinin (Waidmann, Ruiz Rosquete, Schöller, et al., 2019). Additionally, Exocyst70A3 was identified to control the depth of the root system by modulating PIN4‐dependent auxin transport (Ogura et al., 2019). Both CKX2 and EXO70A3 modulate RSA components via auxin‐dependent root gravitropic growth, again showing a crucial role of auxin transport and signalling in root phenotypes.
The genetic loci encoding for the transcription factor WRKY DNA‐BINDING PROTEIN 25 (WRKY25), CATION‐PROTON EXCHANGER 13 (CHX13) and DOUBLE BENDING 1 (DOB1) were identified to be associated with the salt avoidance response of the PR in a halotropism assay. In addition, CHX13 and DOB1 regulate Na+/K+ homeostasis and shoot dry weight under salt stress (Deolu‐Ajayi et al., 2019). Expression of High‐affinity K + transporter 1 (HKT1) was identified to be associated with average LR length. High HKT1 expression in the root stele inhibits LR development in salt, which can be partially rescued by adding potassium (Julkowska et al., 2017). Moreover, CYTOCHROME P450 FAMILY 79 SUBFAMILY B2 (CYP79B2) has an important role in biosynthesis of camalexin, indole glucosinolates and auxin, by converting tryptophan to indole‐3‐acetaldoxime (IAOx). CYP79B2 was identified by GWAS to be associated with the ratio of average lateral and main root length. The cyp79b2/cyp79b3 double mutants showed a reduction in both number and length of LRs under salt stress, but not under control conditions (Julkowska et al., 2017; Figure 1).
For crops, genetic control of RSA is largely unelucidated, while natural variation in RSA plasticity in response to salt has been found in maize and rice. In maize, the Aux/IAA TF family member ZmIAA1 and the GRAS‐type TF family member ZmGRAS43, were identified to be associated with modulating RSA in response to salinity stress (P. Li, Yang, et al., 2021). Another recent study showed that rice yields in saline soil can be improved via a QTL containing SOIL SURFACE ROOTING 1 (qSOR1), a homolog of DEEPER ROOTING 1 (DRO1), which is modifying root growth direction to a shallower root growth angle (Kitomi et al., 2020). However, in the absence of ion accumulation data of the soil the physiological relevance of the benefit of developing shallower root systems in this case is still unclear. In contrast, tomato seedlings growing in rhizotrons placed their LRs preferentially lower, avoiding the higher soil layers in which salt accumulated (Gandullo et al., 2021). Here, the genetic loci that contribute to the response remain to be characterized. Thus, a better understanding of RSA modulation is required to directly contribute to salt tolerance and may provide guidance to future breeding in salinized soil.
5. CELL WALL COMPOSITION MODULATION UNDER SALT STRESS
Plant cells are surrounded by cell walls that typically consist of cellulose, hemicellulose, pectin, structural proteins, glycoproteins and lignin for some cell types. Salt induced cell wall responses, including polysaccharide deposition, pectin modifications and microfibril orientation benefit plants to survive in salt stress as reviewed (Byrt, Munns, Burton, Gilliham, & Wege, 2018). Cell wall composition can be changed dynamically in response to biotic and abiotic stresses, and differs between species and cell types (Feng, Lindner, Robbins, & Dinneny, 2016; Vaahtera, Schulz, & Hamann, 2019; Wolf, Hématy, & Höfte, 2012).
Recent studies show that biosynthesis genes of cell wall components, including lignin (A. Q. Duan et al., 2020), arabinose (C. Zhao et al., 2019) and galactan (Yan et al., 2021), can contribute to salt tolerance. The modulation of root structural barriers via cell wall composition changes could reduce water loss and limit Na+ entry in roots (Byrt et al., 2018). Such changes include lignification and suberization in both endodermis and exodermis (Barberon, Vermeer, De Bellis, et al., 2016; Kajala et al., 2021). Lignification in higher plants provides firmness and hydrophobicity to the secondary cell walls and thus forms a barrier to protect plant against stresses (Q. Zhao, 2016). Similarly, suberization also generates hydrophobic and lipophilic secondary cell wall macromolecules acting as a barrier to restrict water and solutes (Andersen, Barberon, & Geldner, 2015). Salt stress increases root lignin content while reducing arabinoxylan content in maize (Oliveira et al., 2020). In Arabidopsis, overexpression of a suberin biosynthesis enzyme β‐Ketoacyl‐CoA Synthase (VvKCS) from grape Vitis vinifera L. enhanced salt tolerance (Z. Yang et al., 2020). In rice, class II TREHALOSE‐PHOSPHATE‐SYNTHASE gene (OsTPS8) was identified to positively regulate suberin deposition and to enhance salt tolerance (Vishal, Krishnamurthy, Ramamoorthy, & Kumar, 2019).
The Casparian strip, primarily made of lignin, is affecting the radial transport of water and minerals to the vasculature tissue (Naseer et al., 2012). After exposure to salt, the radial width of the Casparian strip was increased in maize (Karahara, Ikeda, Kondo, & Uetake, 2004). In Arabidopsis, salt stress enhances suberization of the root endodermal layer (Barberon et al., 2016), while in rice and maize lignification and suberization occur at both endodermal and exodermal root layers (Krishnamurthy et al., 2009; Krishnamurthy, Ranathunge, Nayak, Schreiber, & Mathew, 2011; Tylová, Pecková, Blascheová, & Soukup, 2017). However, the underlying molecular mechanisms of how barriers at the root endodermis and exodermis affect plant salt stress responses remain unclear.
Salt‐induced cell wall dynamic modifications also induce cell wall integrity sensing pathways, monitored by cell wall localized receptor‐like kinases, such as FERONIA (FER), to induce downstream signalling and further regulate salt tolerance (Dünser et al., 2019; Feng et al., 2018; Gigli‐Bisceglia, van Zelm, Huo, Lamers, & Testerink, 2020). Together, these findings suggest that dynamic salt‐induced changes in root cell wall compositions, as well as cell wall sensing are crucial for plant salt responses and ultimately tolerance.
6. CONCLUSION AND PROSPECTS
Plants can dynamically adjust their root growth components (e.g., density, length and angle) locally in response to salinity, to minimize their metabolic cost and the impact of the stresses. Local root growth plasticity responses appear crucial for plants to optimize architecture spatially and temporally under stress conditions (Julkowska et al., 2017; Kazan & Lyons, 2016; Korver et al., 2018). However, the regulation of salt‐induced root growth plasticity is still largely unknown. The current available tools using plant tissue‐specific and cell‐specific approaches that can analyse a few cells or a small area specifically based on mass spectrometry, biosensors or single‐cell omics can help us to unravel the mechanisms underlying local root growth in response to salt stress (Chen et al., 2020; Novák, Napier, & Ljung, 2017). We speculate that by activating local stress response pathways to accomplish local growth plasticity, salt stress could induce not only local developmental changes, but also systemic or distal signals, which are also crucial for adequate stress responses (H. Li, Testerink, et al., 2021).
This review discussed the regulation of dynamic root growth by salt and the underlying mechanisms that are expected to contribute to future agricultural efforts to promote crop stress resilience. In a natural heterogeneous soil, environment roots need to flexibly respond to several environmental cues. Thus, plant root growth plasticity in saline soil presents the outcome of the root dynamic growth affected by salt stress, soil type, climate, biota and other environmental conditions. Further prediction and modelling for the complex interactions between roots and saline soil is required, to provide insights into the mechanisms and new leads for improving agricultural production.
Moreover, more research efforts are needed to expand the knowledge beyond Arabidopsis; the lack of molecular tools is hindering the study of different crop species and natural varieties. On the positive side, natural variation approaches have successfully identified new genetic components contributing to salinity tolerance in crops species, including rice (Patishtan, Hartley, de Carvalho, & Maathuis, 2018), maize (M. Zhang, Liang, et al., 2019), tomato (Z. Wang et al., 2020), soybean (W. Zhang, Liao, et al., 2019) and barley (Hordeum vulgare; Hazzouri et al., 2018), which will be valuable molecular entries to further characterize the molecular mechanisms and to contribute to future engineering of more resilient crops.
Finally, the progress in developing new phenotyping techniques and platforms will help us capture the diverse root local responses among different species in both spatial and temporal aspects, and their relevance for salt resilience. For example, different RSA patterns were shown to be correlated with shoot Na+/K+ homeostasis in Arabidopsis when they were grown in agar plates (Julkowska et al., 2014). In tomato plants grown in soil, the most severe change in RSA under salt conditions was the suppression of LR emergence at the soil surface were salts accumulate, which could be an adaptive response (Gandullo et al., 2021). On the other hand, in rice, the near‐isogenic line qsor1‐NIL that had ‘soil‐surface roots’ showed a significant increase in yield in saline paddies, compared to the cultivars without the soil‐surface roots (Kitomi et al., 2020). Therefore, further evidence on a range of species and soil conditions is needed before general or specific beneficial root response strategies can be identified that would be future target phenotypes for breeding to optimally support whole plant salt resilience.
CONFLICT OF INTEREST
The authors declare that there is no conflict of interest.
Zou, Y. , Zhang, Y. , & Testerink, C. (2022). Root dynamic growth strategies in response to salinity. Plant, Cell & Environment, 45, 695–704. 10.1111/pce.14205
Funding information China Scholarship Council; H2020 European Research Council, Grant/Award Number: 724321
Contributor Information
Yutao Zou, Email: yutao.zou@wur.nl.
Christa Testerink, Email: christa.testerink@wur.nl.
DATA AVAILABILITY STATEMENT
Data sharing not applicable to this article as no datasets were generated or analysed during the current study.
REFERENCES
- Abas, L. , Benjamins, R. , Malenica, N. , Paciorek, T. T. , Wiřniewska, J. , Moulinier‐Anzola, J. C. , … Luschnig, C. (2006). Intracellular trafficking and proteolysis of the Arabidopsis auxin‐efflux facilitator PIN2 are involved in root gravitropism. Nature Cell Biology, 8, 249–256. [DOI] [PubMed] [Google Scholar]
- Adamowski, M. , & Friml, J. (2015). PIN‐dependent auxin transport: Action, regulation, and evolution. Plant Cell, 27, 20–32. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Alonso‐Blanco, C. , Andrade, J. , Becker, C. , Bemm, F. , Bergelson, J. , Borgwardt, K. M. , … Zhou, X. (2016). 1,135 genomes reveal the global pattern of polymorphism in Arabidopsis thaliana. Cell, 166, 481–491. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ambastha, V. , Friedmann, Y. , & Leshem, Y. (2020). Laterals take it better – Emerging and young lateral roots survive lethal salinity longer than the primary root in Arabidopsis. Scientific Reports, 10, 1–11. 10.1038/s41598-020-60163-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Andersen, T. G. , Barberon, M. , & Geldner, N. (2015). Suberization‐the second life of an endodermal cell. Current Opinion in Plant Biology, 28, 9–15. 10.1016/j.pbi.2015.08.004 [DOI] [PubMed] [Google Scholar]
- Atkinson, J. A. , Pound, M. P. , Bennett, M. J. , & Wells, D. M. (2019). Uncovering the hidden half of plants using new advances in root phenotyping. Current Opinion in Biotechnology, 55, 1–8. 10.1016/j.copbio.2018.06.002 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Awlia, M. , Alshareef, N. , Saber, N. , Korte, A. , Oakey, H. , Panzarová, K. , … Julkowska, M. M. (2021). Genetic mapping of the early responses to salt stress in Arabidopsis thaliana. The Plant Journal, 107(2), 544–563. [DOI] [PubMed] [Google Scholar]
- Baral, A. , Irani, N. G. , Fujimoto, M. , Nakano, A. , Mayor, S. , & Mathew, M. K. (2015). Salt‐induced remodeling of spatially restricted clathrin‐independent endocytic pathways in arabidopsis root. Plant Cell, 27, 1297–1315. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Barberon, M. , Vermeer, J. E. M. , De Bellis, D. , Wang, P. , Naseer, S. , Andersen, T. G , … Geldner, N. (2016). Adaptation of root function by nutrient‐induced plasticity of endodermal differentiation. Cell, 164(3), 447–459. 10.1016/j.cell.2015.12.021 [DOI] [PubMed] [Google Scholar]
- Bengough Glyn, A. , Loades, K. , & McKenzie, B. M. (2016). Root hairs aid soil penetration by anchoring the root surface to pore walls. Journal of Experimental Botany, 67, 1071–1078. 10.1093/jxb/erv560. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Brunoud, G. , Wells, D. M. , Oliva, M. , Larrieu, A. , Mirabet, V. , Burrow, A. H. , … Vernoux, T. (2012). A novel sensor to map auxin response and distribution at high spatio‐temporal resolution. Nature, 482, 103–106. [DOI] [PubMed] [Google Scholar]
- Byrt, C. S. , Munns, R. , Burton, R. A. , Gilliham, M. , & Wege, S. (2018). Root cell wall solutions for crop plants in saline soils. Plant Science, 269, 47–55. 10.1016/j.plantsci.2017.12.012 [DOI] [PubMed] [Google Scholar]
- Cheeseman, J. M. (2015). The evolution of halophytes, glycophytes and crops, and its implications for food security under saline conditions. The New Phytologist, 206, 557–570. [DOI] [PubMed] [Google Scholar]
- Chen, A. , Hansen, T. H. , Olsen, L. I. , Palmgren, M. , Husted, S. , Schjoerring, J. K. , & Persson, D. P. (2020). Towards single‐cell ionomics: A novel micro‐scaled method for multi‐element analysis of nanogram‐sized biological samples. Plant Methods, 16, 1–13. 10.1186/s13007-020-00566-9 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Choi, H. S. , & Cho, H. T. (2019). Root hairs enhance Arabidopsis seedling survival upon soil disruption. Scientific Reports, 9, 1–10. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Choi, W. G. , Toyota, M. , Kim, S. H. , Hilleary, R. , & Gilroy, S. (2014). Salt stress‐induced Ca2+ waves are associated with rapid, long‐distance root‐to‐shoot signaling in plants. Proceedings of the National Academy of Sciences of the United States of America, 111, 6497–6502. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Correa, J. , Postma, J. A. , Watt, M. , & Wojciechowski, T. (2019). Soil compaction and the architectural plasticity of root systems. Journal of Experimental Botany, 70, 6019–6034. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Deolu‐Ajayi, A. O. , Meyer, A. J. , Haring, M. A. , Julkowska, M. M. , & Testerink, C. (2019). Genetic loci associated with early Salt stress responses of roots. iScience, 21, 458–473. 10.1016/j.isci.2019.10.043 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dietrich, D. , Pang, L. , Kobayashi, A. , Fozard, J. A. , Boudolf, V. , Bhosale, R. , … Bennett, M. J. (2017). Root hydrotropism is controlled via a cortex‐specific growth mechanism. Nature Plants, 3, 17057 http://www.nature.com/articles/nplants201757 [DOI] [PubMed] [Google Scholar]
- Dinneny, J. R. (2019). Developmental responses to water and salinity in root systems. Annual Review of Cell and Developmental Biology, 35, 239–257. [DOI] [PubMed] [Google Scholar]
- Dinneny, J. R. , Long, T. A. , Wang, J. Y. , Jung, J. W. , Mace, D. , Pointer, S. , … Benfey, P. N. (2008). Cell identity mediates the response of Arabidopsis roots to abiotic stress. Science, 320, 942–945. 10.1126/science.1153795 [DOI] [PubMed] [Google Scholar]
- Duan, A. Q. , Tao, J. P. , Jia, L. L. , Tan, G. F. , Liu, J. X. , Li, T. , … Xiong, A. S. (2020). AgNAC1, a celery transcription factor, related to regulation on lignin biosynthesis and salt tolerance. Genomics, 112, 5254–5264. 10.1016/j.ygeno.2020.09.049 [DOI] [PubMed] [Google Scholar]
- Duan, L. , Dietrich, D. , Ng, C. H. , Yeen Chan, P. M. , Bhalerao, R. , Bennett, M. J. , & Dinneny, J. R. (2013). Endodermal ABA signaling promotes lateral root quiescence during salt stress in Arabidopsis seedlings. Plant Cell, 25, 324–341. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dünser, K. , Gupta, S. , Herger, A. , Feraru, M. I. , Ringli, C. , & Kleine‐Vehn, J. (2019). Extracellular matrix sensing by FERONIA and leucine‐rich repeat extensins controls vacuolar expansion during cellular elongation in Arabidopsis thaliana. The EMBO Journal, 38, 1–12. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Eapen, D. , Barroso, M. L. , Ponce, G. , Campos, M. E. , & Cassab, G. I. (2005). Hydrotropism: Root growth responses to water. Trends in Plant Science, 10, 44–50. [DOI] [PubMed] [Google Scholar]
- FAO (2015) Global soil resources, Available from https://hal.archives-ouvertes.fr/hal-01241064/.
- Fendrych, M. , Akhmanova, M. , Merrin, J. , Glanc, M. , Hagihara, S. , Takahashi, K. , … Friml, J. (2014). Rapid and reversible root growth inhibition by TIR1 auxin signalling. Nature Plants, 4, 1–30. https://doi-org/10.1038/s41477-018-0190-1 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fendrych, M. , Leung, J. , & Friml, J. (2016). Tir1/AFB‐Aux/IAA auxin perception mediates rapid cell wall acidification and growth of Arabidopsis hypocotyls. eLife, 5, 1–19. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Feng, W. , Kita, D. , Peaucelle, A. , Cartwright, H. N. , Doan, V. , Duan, Q. , … Dinneny, J. R. (2018). The FERONIA receptor kinase maintains cell‐wall integrity during salt stress through Ca2+ signaling. Current Biology, 28, 666–675.e5. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Feng, W. , Lindner, H. , Robbins, N. E. , & Dinneny, J. R. (2016). Growing out of stress: The role of cell‐ and organ‐scale growth control in plant water‐stress responses. Plant Cell, 28, 1769–1782. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ferrieri, A. P. , Machado, R. A. R. , Arce, C. C. M. , Kessler, D. , Baldwin, I. T. , & Erb, M. (2017). Localized micronutrient patches induce lateral root foraging and chemotropism in Nicotiana attenuata. Journal of Integrative Plant Biology, 59, 759–771. [DOI] [PubMed] [Google Scholar]
- Flowers, T. J. , & Colmer, T. D. (2008). Salinity tolerance in halophytes. The New Phytologist, 179, 945–963. https://doi-org/10.1111/j.1469-8137.2008.02531.x [DOI] [PubMed] [Google Scholar]
- Galvan‐Ampudia, C. S. , Julkowska, M. M. , Darwish, E. , Gandullo, J. , Korver, R. A. , Brunoud, G. , … Testerink, C. (2013). Halotropism is a response of plant roots to avoid a saline environment. Current Biology, 23, 2044–2050. 10.1016/j.cub.2013.08.042 [DOI] [PubMed] [Google Scholar]
- Gandullo, J. , Ahmad, S. , Darwish, E. , Karlova, R. , & Testerink, C. (2021). Phenotyping tomato root developmental plasticity in response to salinity in soil rhizotrons. Plant Phenomics, 2021, 1–14. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gigli‐Bisceglia, N. , van Zelm, E. , Huo, W. , Lamers, J. & Testerink, C. (2020). Salt stress responses, plant cell wall signaling, pectin modifications, cell wall integrity. bioRxiv, pp. 1–30.
- Han, G. , Wei, X. , Dong, X. , Wang, C. , Sui, N. , Guo, J. , … Wang, B. (2020). Arabidopsis ZINC FINGER PROTEIN1 acts downstream of GL2 to repress root hair initiation and elongation by directly suppressing bHLH genes. Plant Cell, 32, 206–225. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hazzouri, K. M. , Khraiwesh, B. , Amiri, K. M. A. , Pauli, D. , Blake, T. , Shahid, M. , … Masmoudi, K. (2018). Mapping of HKT1;5 gene in barley using GWAS approach and its implication in salt tolerance mechanism. Frontiers in Plant Science, 9, 1–13. 10.3389/fpls.2018.00156 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ismail, A. M. , & Horie, T. (2017). Genomics, physiology, and molecular breeding approaches for improving salt tolerance. Annual Review of Plant Biology, 68, 405–434. [DOI] [PubMed] [Google Scholar]
- Jiang, Z. , Zhou, X. , Tao, M. , Yuan, F. , Liu, L. , Wu, F. , … Pei, Z. M. (2019). Plant cell‐surface GIPC sphingolipids sense salt to trigger Ca2+ influx. Nature, 572, 341–346. 10.1038/s41586-019-1449-z [DOI] [PubMed] [Google Scholar]
- Julkowska, M. M. , Hoefsloot, H. C. J. , Mol, S. , Feron, R. , de Boer, G. J. , Haring, M. A. , & Testerink, C. (2014). Capturing arabidopsis root architecture dynamics with root‐fit reveals diversity in responses to salinity. Plant Physiology, 166, 1387–1402. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Julkowska, M. M. , Koevoets, I. T. , Mol, S. , Hoefsloot, H. , Feron, R. , Tester, M. A. , … Testerink, C. (2017). Genetic components of root architecture remodeling in response to salt stress. Plant Cell, 29, 3198–3213. 10.1105/tpc.16.00680. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Julkowska, M. M. , & Testerink, C. (2015). Tuning plant signaling and growth to survive salt. Trends in Plant Science, 20, 586–594. 10.1016/j.tplants.2015.06.008 [DOI] [PubMed] [Google Scholar]
- Kajala, K. , Gouran, M. , Shaar‐Moshe, L. , Mason, G. A. , Rodriguez‐Medina, J. , Kawa, D. , … Brady, S. M. (2021). Innovation, conservation, and repurposing of gene function in root cell type development. Cell, 184, 3333–3348. 10.1016/j.cell.2021.04.024 [DOI] [PubMed] [Google Scholar]
- Karahara, I. , Ikeda, A. , Kondo, T. , & Uetake, Y. (2004). Development of the Casparian strip in primary roots of maize under salt stress. Planta, 219, 41–47. [DOI] [PubMed] [Google Scholar]
- Kawa, D. , Meyer, A. J. , Dekker, H. L. , Abd‐el‐Haliem, A. M. , Gevaert, K. , van de Slijke, E. , … Testerink, C. (2020). SnRK2 protein kinases and mRNA decapping machinery control root development and response to salt. Plant Physiology, 182, 361–371. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kazan, K. , & Lyons, R. (2016). The link between flowering time and stress tolerance. Journal of Experimental Botany, 67, 47–60. [DOI] [PubMed] [Google Scholar]
- Kellermeier, F. , Armengaud, P. , Seditas, T. J. , Danku, J. , Salt, D. E. , & Amtmann, A. (2014). Analysis of the root system architecture of Arabidopsis provides a quantitative readout of crosstalk between nutritional signals. Plant Cell, 26, 1480–1496. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kimura, T. , Haga, K. , Shimizu‐Mitao, Y. , Takebayashi, Y. , Kasahara, H. , Hayashi, K. I. , … Sakai, T. (2018). Asymmetric auxin distribution is not required to establish root phototropism in Arabidopsis. Plant & Cell Physiology, 59, 823–835. [DOI] [PubMed] [Google Scholar]
- Kitomi, Y. , Hanzawa, E. , Kuya, N. , Inoue, H. , Hara, N. , Kawai, S. , … Uga, Y. (2020). Root angle modifications by the DRO1 homolog improve rice yields in saline paddy fields. Proceedings of the National Academy of Sciences of the United States of America, 117, 21242–21250. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Koevoets, I. T. , Venema, J. H. , Elzenga, J. T. M. , & Testerink, C. (2016). Roots withstanding their environment: Exploiting root system architecture responses to abiotic stress to improve crop tolerance. Frontiers in Plant Science, 7, 1335. 10.3389/fpls.2016.01335 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Korver, R. A. , van den Berg, T. , Meyer, A. J. , Galvan‐Ampudia, C. S. , ten Tusscher, K. H. W. J. , & Testerink, C. (2020). Halotropism requires phospholipase Dζ1‐mediated modulation of cellular polarity of auxin transport carriers. Plant, Cell & Environment, 43, 143–158. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Korver, R. A. , Koevoets, I. T. , & Testerink, C. (2018). Out of shape during stress: A key role for auxin. Trends in Plant Science, 23, 783–793. 10.1016/j.tplants.2018.05.011 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Krishnamurthy, P. , Ranathunge, K. , Franke, R. , Prakash, H. S. , Schreiber, L. , & Mathew, M. K. (2009). The role of root apoplastic transport barriers in salt tolerance of rice (Oryza sativa L.). Planta, 230, 119–134. [DOI] [PubMed] [Google Scholar]
- Krishnamurthy, P. , Ranathunge, K. , Nayak, S. , Schreiber, L. , & Mathew, M. K. (2011). Root apoplastic barriers block Na + transport to shoots in rice (Oryza sativa L.). Journal of Experimental Botany, 62, 4215–4228. https://doi-org/10.1093/jxb/err135 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lamers, J. , van der Meer, T. , & Testerink, C. (2020). How plants sense and respond to stressful environments. Plant Physiology, 182, 1624–1635. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Li, B. , Tester, M. , & Gilliham, M. (2017). Chloride on the move. Trends in Plant Science, 22, 236–248. [DOI] [PubMed] [Google Scholar]
- Li, H. , Testerink, C. , & Zhang, Y. (2021). How roots and shoots communicate through stressful times. Trends in Plant Science, 26, 1–13. 10.1016/j.tplants.2021.03.005 [DOI] [PubMed] [Google Scholar]
- Li, P. , Yang, X. , Wang, H. , Pan, T. , Wang, Y. , Xu, Y. , … Yang, Z. (2021). Genetic control of root plasticity in response to salt stress in maize. Theoretical and Applied Genetics, 134, 1475–1492. 10.1007/s00122-021-03784-4 [DOI] [PubMed] [Google Scholar]
- Lynch, J. (1995). Root architecture and plant productivity. Plant Physiology, 109, 7–13. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Massa, G. D. , & Gilroy, S. (2003). Touch modulates gravity sensing to regulate the growth of primary roots of Arabidopsis thaliana. The Plant Journal, 33, 435–445. [DOI] [PubMed] [Google Scholar]
- McLoughlin, F. , Galvan‐Ampudia, C. S. , Julkowska, M. M. , Caarls, L. , Does, D. , van der Laurière, C. , … Testerink, C. (2012). The Snf1‐related protein kinases SnRK2.4 and SnRK2.10 are involved in maintenance of root system architecture during salt stress. The Plant Journal, 72, 436–449. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Morita, M. T. , & Tasaka, M. (2004). Gravity sensing and signaling. Current Opinion in Plant Biology, 7, 712–718. [DOI] [PubMed] [Google Scholar]
- Morris, E. C. , Griffiths, M. , Golebiowska, A. , Mairhofer, S. , Burr‐Hersey, J. , Goh, T. , … Bennett, M. J. (2017). Shaping 3D root system architecture. Current Biology, 27, R919–R930. 10.1016/j.cub.2017.06.043 [DOI] [PubMed] [Google Scholar]
- Munns, R. , Day, D. A. , Fricke, W. , Watt, M. , Arsova, B. , Barkla, B. J. , … Tyerman, S. D. (2020). Energy costs of salt tolerance in crop plants. The New Phytologist, 225, 1072–1090. [DOI] [PubMed] [Google Scholar]
- Munns, R. , & Gilliham, M. (2015). Salinity tolerance of crops—What is the cost? The New Phytologist, 208, 668–673. https://doi-org/10.1111/nph.13519 [DOI] [PubMed] [Google Scholar]
- Munns, R. , & Tester, M. (2008). Mechanisms of salinity tolerance. Annual Review of Plant Biology, 59, 651–681. 10.1146/annurev.arplant.59.032607.092911 [DOI] [PubMed] [Google Scholar]
- Muthert, L. W. F. , Izzo, L. G. , van Zanten, M. , & Aronne, G. (2020). Root tropisms: Investigations on earth and in space to unravel plant growth direction. Frontiers in Plant Science, 10, 1–22. 10.3389/fpls.2019.01807 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nakayama, N. , Smith, R. S. , Mandel, T. , Robinson, S. , Kimura, S. , Boudaoud, A. , & Kuhlemeier, C. (2012). Mechanical regulation of auxin‐mediated growth. Current Biology, 22, 1468–1476. [DOI] [PubMed] [Google Scholar]
- Naseer, S. , Lee, Y. , Lapierre, C. , Franke, R. , Nawrath, C. , & Geldner, N. (2012). Casparian strip diffusion barrier in Arabidopsis is made of a lignin polymer without suberin. Proceedings of the National Academy of Sciences of the United States of America, 109, 10101–10106. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Novák, O. , Napier, R. , & Ljung, K. (2017). Zooming in on plant hormone analysis: Tissue‐ and cell‐specific approaches. Annual Review of Plant Biology, 68, 323–348. [DOI] [PubMed] [Google Scholar]
- Ogura, T. , Goeschl, C. , Filiault, D. , Mirea, M. , Slovak, R. , Wolhrab, B. , … Busch, W. (2019). Root system depth in Arabidopsis is shaped by EXOCYST70A3 via the dynamic modulation of auxin transport. Cell, 178, 400–412. 10.1016/j.cell.2019.06.021 [DOI] [PubMed] [Google Scholar]
- Oliveira, D. M. , Mota, T. R. , Salatta, F. V. , Sinzker, R. C. , Končitíková, R. , Kopečný, D. , … dos Santos, W. D. (2020). Cell wall remodeling under salt stress: Insights into changes in polysaccharides, feruloylation, lignification, and phenolic metabolism in maize. Plant, Cell & Environment, 43, 2172–2191. [DOI] [PubMed] [Google Scholar]
- Osmont, K. S. , Sibout, R. , & Hardtke, C. S. (2007). Hidden branches: Developments in root system architecture. Annual Review of Plant Biology, 58, 93–113. [DOI] [PubMed] [Google Scholar]
- Pagès, L. , Pointurier, O. , Moreau, D. , Voisin, A. S. , & Colbach, N. (2020). Metamodelling a 3D architectural root‐system model to provide a simple model based on key processes and species functional groups. Plant and Soil, 448, 231–251. [Google Scholar]
- Patishtan, J. , Hartley, T. N. , de Carvalho, R. F. , & Maathuis, F. J. M. (2018). Genome‐wide association studies to identify rice salt‐tolerance markers. Plant, Cell & Environment, 41, 970–982. [DOI] [PubMed] [Google Scholar]
- Petrella, D. P. , Han, E. , Nangle, E. J. , Scheerens, J. C. , Gardner, D. S. , & Blakeslee, J. J. (2018). Modulation of halotropic growth in rough bluegrass (Poa trivialis L.) by flavonoids and light. Environmental and Experimental Botany, 153, 163–175. 10.1016/j.envexpbot.2018.05.013 [DOI] [Google Scholar]
- Rahman, M. U. , Ijaz, M. , Qamar, S. , Bukhari, S. A. , & Malik, K. (2018). Abiotic stress signaling in rice crop. Amsterdam, Netherlands: Elsevier. 10.1016/B978-0-12-814332-2.00027-7 [DOI] [Google Scholar]
- Rahnama, A. , Munns, R. , Poustini, K. , & Watt, M. (2011). A screening method to identify genetic variation in root growth response to a salinity gradient. Journal of Experimental Botany, 62, 69–77. [DOI] [PubMed] [Google Scholar]
- Rellán‐Álvarez, R. , Lobet, G. , & Dinneny, J. R. (2016). Environmental control of root system biology. Annual Review of Plant Biology, 67, 619–642. [DOI] [PubMed] [Google Scholar]
- Rellán‐Álvarez, R. , Lobet, G. , Lindner, H. , Pradier, P. L. , Sebastian, J. , Yee, M. C. , … Dinneny, J. R. (2015). GLO‐roots: An imaging platform enabling multidimensional characterization of soil‐grown root systems. eLife, 4, 1–26. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Salazar‐Henao, J. E. , Vélez‐Bermúdez, I. C. , & Schmidt, W. (2016). The regulation and plasticity of root hair patterning and morphogenesis. Development, 143, 1848–1858. [DOI] [PubMed] [Google Scholar]
- Seren, Ü. , Vilhjálmsson, B. J. , Horton, M. W. , Meng, D. , Forai, P. , Huang, Y. S. , … Nordborg, M. (2013). GWAPP: A web application for genome‐wide association mapping in Arabidopsis. Plant Cell, 24, 4793–4805. 10.1105/tpc.112.108068 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Shelef, O. , Lazarovitch, N. , Rewald, B. , Golan‐Goldhirsh, A. , & Rachmilevitch, S. (2010). Root halotropism: Salinity effects on Bassia indica root. Plant Biosystems, 144, 471–478. https://doi-org/10.1080/11263501003732001 [Google Scholar]
- Silva‐Navas, J. , Moreno‐Risueno, M. A. , Manzano, C. , Téllez‐Robledo, B. , Navarro‐Neila, S. , Carrasco, V. , … Del Pozo, J. C. (2016). Flavonols mediate root phototropism and growth through regulation of proliferation‐to‐differentiation transition. Plant Cell, 28, 1372–1387. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Stanislas, T. , & Jaillais, Y. (2019). Plant cell biology: How to give root hairs enough ROPs? Current Biology, 29, R405–R407. 10.1016/j.cub.2019.04.023 [DOI] [PubMed] [Google Scholar]
- Su, S. H. , Gibbs, N. M. , Jancewicz, A. L. , & Masson, P. H. (2017). Molecular mechanisms of root gravitropism. Current Biology, 27, R964–R972. [DOI] [PubMed] [Google Scholar]
- Sun, F. , Zhang, W. , Hu, H. , Li, B. , Wang, Y. , Zhao, Y. , … Li, X. (2008). Salt modulates gravity signaling pathway to regulate growth direction of primary roots in arabidopsis. Plant Physiology, 146, 178–188. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Teramoto, S. , Takayasu, S. , Kitomi, Y. , Arai‐Sanoh, Y. , Tanabata, T. , & Uga, Y. (2020). High‐throughput three‐dimensional visualization of root system architecture of rice using X‐ray computed tomography. Plant Methods, 16, 1–14. 10.1186/s13007-020-00612-6 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tylová, E. , Pecková, E. , Blascheová, Z. , & Soukup, A. (2017). Casparian bands and suberin lamellae in exodermis of lateral roots: An important trait of roots system response to abiotic stress factors. Annals of Botany, 120, 71–85. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Vaahtera, L. , Schulz, J. , & Hamann, T. (2019). Cell wall integrity maintenance during plant development and interaction with the environment. Nature Plants, 5, 924–932. 10.1038/s41477-019-0502-0 [DOI] [PubMed] [Google Scholar]
- van den Berg, T. , Korver, R. A. , Testerink, C. , & ten Tusscher, K. H. W. J. (2016). Modeling halotropism: A key role for root tip architecture and reflux loop remodeling in redistributing auxin. Development, 143, 3350–3362. [DOI] [PMC free article] [PubMed] [Google Scholar]
- van Zelm, E. , Zhang, Y. , & Testerink, C. (2020). Salt tolerance mechanisms of plants. Annual Review of Plant Biology, 71, 403–433. https://doi-org/10.1146/annurev-arplant-050718-100005 [DOI] [PubMed] [Google Scholar]
- Vishal, B. , Krishnamurthy, P. , Ramamoorthy, R. , & Kumar, P. P. (2019). OsTPS8 controls yield‐related traits and confers salt stress tolerance in rice by enhancing suberin deposition. The New Phytologist, 221, 1369–1386. [DOI] [PubMed] [Google Scholar]
- Waidmann, S. , Ruiz Rosquete, M. , Schöller, M. , Sarkel, E. , Lindner, H. , LaRue, T , … Dinneny, J. R. (2019). Cytokinin functions as an asymmetric and anti‐gravitropic signal in lateral roots. Nature Communications, 10(1), 3540. 10.1038/s41467-019-11483-4. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wang, Y. , Zhang, W. , Li, K. , Sun, F. , Han, C. , Wang, Y. , & Li, X. (2008). Salt‐induced plasticity of root hair development is caused by ion disequilibrium in Arabidopsis thaliana. Journal of Plant Research, 121, 87–96. [DOI] [PubMed] [Google Scholar]
- Wang, Z. , Hong, Y. , Zhu, G. , Li, Y. , Niu, Q. , Yao, J. , … Zhu, J. K. (2020). Loss of salt tolerance during tomato domestication conferred by variation in a Na+/K+ transporter. The EMBO Journal, 39, 1–14. 10.15252/embj.2019103256. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wolf, S. , Hématy, K. , & Höfte, H. (2012). Growth control and cell wall signaling in plants. Annual Review of Plant Biology, 63, 381–407. [DOI] [PubMed] [Google Scholar]
- Yan, J. , Liu, Y. , Yang, L. , He, H. , Huang, Y. , Fang, L. , … Zhang, A. (2021). Cell wall β‐1,4‐galactan regulated by the BPC1/BPC2‐GALS1 module aggravates salt sensitivity in Arabidopsis thaliana. Molecular Plant, 14, 411–425. 10.1016/j.molp.2020.11.023 [DOI] [PubMed] [Google Scholar]
- Yang, Y. , & Guo, Y. (2018). Elucidating the molecular mechanisms mediating plant salt‐stress responses. The New Phytologist, 217, 523–539. [DOI] [PubMed] [Google Scholar]
- Yang, Z. , Yang, X. , Dong, S. , Ge, Y. , Zhang, X. , Zhao, X. , & Han, N. (2020). Overexpression of β‐Ketoacyl‐CoA synthase from Vitis vinifera L. improves salt tolerance in Arabidopsis thaliana. Frontiers in Plant Science, 11, 1–11. 10.3389/fpls.2020.564385 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yoshino, K. , Numajiri, Y. , Teramoto, S. , Kawachi, N. , Tanabata, T. , Tanaka, T. , … Uga, Y. (2019). Towards a deeper integrated multi‐omics approach in the root system to develop climate‐resilient rice. Molecular Breeding, 39, 165. 10.1007/s11032-019-1058-4 [DOI] [Google Scholar]
- Zhang, C. , Simpson, R. J. , Kim, C. M. , Warthmann, N. , Delhaize, E. , Dolan, L. , … Ryan, P. R. (2018). Do longer root hairs improve phosphorus uptake? Testing the hypothesis with transgenic Brachypodium distachyon lines overexpressing endogenous RSL genes. The New Phytologist, 217, 1654–1666. [DOI] [PubMed] [Google Scholar]
- Zhang, M. , Liang, X. , Wang, L. , Cao, Y. , Song, W. , Shi, J. , … Jiang, C. (2019). A HAK family Na+ transporter confers natural variation of salt tolerance in maize. Nature Plants, 5, 1297–1308. 10.1038/s41477-019-0565-y [DOI] [PubMed] [Google Scholar]
- Zhang, W. , Liao, X. , Cui, Y. , Ma, W. , Zhang, X. , du, H. , … Yu, D. (2019). A cation diffusion facilitator, GmCDF1, negatively regulates salt tolerance in soybean. PLoS Genetics, 15, 1–27. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zhang, Y. , He, P. , Ma, X. , Yang, Z. , Pang, C. , Yu, J. , … Xiao, G. (2019). Auxin‐mediated statolith production for root gravitropism. The New Phytologist, 224, 761–774. [DOI] [PubMed] [Google Scholar]
- Zhao, C. , Zayed, O. , Zeng, F. , Liu, C. , Zhang, L. , Zhu, P. , … Zhu, J. K. (2019). Arabinose biosynthesis is critical for salt stress tolerance in Arabidopsis. The New Phytologist, 224, 274–290. [DOI] [PubMed] [Google Scholar]
- Zhao, Q. (2016). Lignification: Flexibility, biosynthesis and regulation. Trends in Plant Science, 21, 713–721. [DOI] [PubMed] [Google Scholar]
- Zhao, Y. , Wang, T. , Zhang, W. , & Li, X. (2011). SOS3 mediates lateral root development under low salt stress through regulation of auxin redistribution and maxima in Arabidopsis. The New Phytologist, 189, 1122–1134. 10.1111/j.1469-8137.2010.03545.x. [DOI] [PubMed] [Google Scholar]
- Zhou, J. J. , & Luo, J. (2018). The PIN‐FORMED auxin efflux carriers in plants. International Journal of Molecular Sciences, 19, 1–21. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zolla, G. , Heimer, Y. M. , & Barak, S. (2010). Mild salinity stimulates a stress‐induced morphogenic response in Arabidopsis thaliana roots. Journal of Experimental Botany, 61, 211–224. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zwiewka, M. , Nodzyński, T. , Robert, S. , Vanneste, S. , & Friml, J. (2015). Osmotic stress modulates the balance between exocytosis and clathrin‐mediated endocytosis in Arabidopsis thaliana. Molecular Plant, 8, 1175–1187. [DOI] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Data Availability Statement
Data sharing not applicable to this article as no datasets were generated or analysed during the current study.
