TABLE 1.
Information about the genes involved in the BR signaling in rice and their encoded proteins.
| Gene ID | Gene name | Nomenclature | Start (bp) | End (bp) Strand | Genomic length (bp) | Transcript length (bp) | Exons: Introns | Protein length (aa) |
|---|---|---|---|---|---|---|---|---|
| LOC_Os01g10840 | OsGSK1 | OsBRs1-1 | 4350502 | 5778466 | 4186 | 1846 | 12:11 | 405 |
| LOC_Os01g12690 | OsOFP1 | OSBRs1-2 | 7009032 | 7010505 | 1473 | 1473 | 01:00 | 395 |
| LOC_Os01g12890 | OsEMF1 | OsBRs1-3 | 7157779 | 7164385 | 6606 | 4300 | 04:03 | 1058 |
| LOC_Os01g52050 | OsBRI1 | OsBRs1-4 | 29927542 | 29931487 | 3945 | 3945 | 01:00 | 1122 |
| LOC_Os01g64430 | OsOFP8 | OSBRs1-5 | 37396144 | 37397573 | 1429 | 1429 | 01:00 | 229 |
| LOC_Os02g22130 | OsGAP1 | OsBRs2-1 | 13173638 | 13176606 | 2968 | 1628 | 03:02 | 166 |
| LOC_Os02g47280 | OsGRF4 | OsBRs2-2 | 28863172 | 28866997 | 3825 | 1721 | 03:02 | 423 |
| LOC_Os02g52340 | OsMADS22 | OsBRs2-3 | 32038901 | 32045130 | 6229 | 1567 | 08:07 | 229 |
| LOC_Os02g54600 | OsMAPKK4 | OsBRs2-4 | 33442068 | 33443948 | 1880 | 1880 | 01:00 | 370 |
| LOC_Os02g58390 | OsELT1 | OsBRs2-5 | 35705634 | 35710799 | 5165 | 2754 | 02:01 | 691 |
| LOC_Os03g08754 | OsMADS47 | OsBRs3-1 | 4519404 | 4525778 | 6374 | 1460 | 08:07 | 251 |
| LOC_Os03g13010 | OsTUD1 | OsBRs3-2 | 7029148 | 7031702 | 2554 | 2554 | 01:00 | 460 |
| LOC_Os03g38210 | OsGAMYBL2 | OsBRs3-3 | 21212848 | 21215801 | 2953 | 1829 | 03:02 | 523 |
| LOC_Os03g44500 | OsPPKL1 | OsBRs3-4 | 25042314 | 25051072 | 8758 | 3743 | 21:20 | 1004 |
| LOC_Os03g45420 | OsPUB24 | OsBRs3-5 | 25638650 | 25642193 | 3543 | 3459 | 02:01 | 825 |
| LOC_Os03g49990 | OsRGA1 | OsBRs3-6 | 28512624 | 28515179 | 2555 | 2555 | 01:00 | 626 |
| LOC_Os04g49230 | OsRAVL1 | OsBRs4-1 | 29366455 | 29368515 | 2060 | 2060 | 01:00 | 317 |
| LOC_Os04g54900 | OsILI1 | OsBRs4-2 | 32657752 | 32658190 | 438 | 338 | 02:01 | 105 |
| LOC_Os04g56500 | OsIBH1 | OsBRs4-3 | 33676316 | 33683540 | 7224 | 6618 | 01:00 | 203 |
| LOC_Os04g56850 | OsARF11 | OsBRs4-4 | 33888003 | 33894393 | 6390 | 3849 | 14:13 | 956 |
| LOC_Os04g58750 | OsBSK3 | OsBRs4-5 | 34942979 | 34949751 | 6772 | 2316 | 08:07 | 359 |
| LOC_Os05g05240 | OsPPKL2 | OsBRs5-1 | 2564220 | 2573158 | 8938 | 3494 | 21:20 | 892 |
| LOC_Os05g06280 | OsBHS1 | OsBRs5-2 | 3203041 | 3214116 | 11075 | 3584 | 19:18 | 1100 |
| LOC_Os05g09520 | OsGW5 | OsBRs5-3 | 5365121 | 5366701 | 1580 | 1494 | 02:01 | 498 |
| LOC_Os05g11730 | OsGSK2 | OsBRs5-4 | 6657480 | 6661493 | 4013 | 1863 | 12:11 | 403 |
| LOC_Os05g27730 | OsWRKY53 | OsBRs5-5 | 16150265 | 16152747 | 2482 | 2075 | 05:04 | 488 |
| LOC_Os05g32270 | OsRLA1 | OsBRs5-6 | 18812389 | 18817699 | 5310 | 1484 | 07:06 | 315 |
| LOC_Os06g03710 | OsDLT | OsBRs6-1 | 1465498 | 1468600 | 3102 | 3102 | 01:00 | 618 |
| LOC_Os06g06090 | OsMAPK6 | OsBRs6-2 | 2806542 | 2813004 | 6462 | 1815 | 06:05 | 399 |
| LOC_Os06g11330 | OsMADS55 | OsBRs6-3 | 5953592 | 5963184 | 9592 | 600 | 06:05 | 200 |
| LOC_Os06g12210 | OsBU1 | OsBRs6-4 | 6556801 | 6557319 | 518 | 264 | 02:01 | 88 |
| LOC_Os06g15620 | OsGSR1 | OsBRs6-5 | 8847701 | 8848847 | 1146 | 1042 | 02:01 | 111 |
| LOC_Os06g48950 | OsARF19 | OsBRs6-6 | 29656968 | 29665195 | 8227 | 3858 | 14:14 | 1139 |
| LOC_Os06g49080 | OsLIC | OsBRs6-7 | 29738879 | 29742503 | 3624 | 1834 | 10:09 | 391 |
| LOC_Os06g50060 | OsPRA2 | OsBRs6-8 | 30336258 | 30336936 | 678 | 678 | 01:00 | 226 |
| LOC_Os07g39220 | OsBZR1 | OsBRs7-1 | 23483808 | 23485344 | 1536 | 1407 | 02:01 | 299 |
| LOC_Os08g07760 | OsBAK1 | OsBRs8-1 | 4344170 | 4350502 | 6332 | 2710 | 11:10 | 625 |
| LOC_Os12g13380 | OsAK3 | OsBRs12-1 | 7476415 | 7480311 | 3896 | 1173 | 06:05 | 242 |
| LOC_Os12g42310 | OsPPKL3 | OsBRs12-2 | 26306762 | 26315803 | 9041 | 4179 | 21:20 | 1010 |