Table 1.

HiFiasm contigs in different size categories and comparison of primary and haploid assemblies generated from HiFiasm genome assembler tool

	Number of contigs	Assembly length (Mb)	N50 (Mb)	N75 (Mb)	busco (%)
HiFiasm assembly
Total contigs	779	826	46	25	99.6
Contigs >40 Mb	10	524	50	46	68.7
Contigs >10 Mb	19	746	48	39	93.9
Contigs >1 Mb	30	784	46	30	99.1
Contigs >100 kb	94	805	46	27	99.0
Between 100 kb and 1 Mb	64	20	0.49	0.22	0.20
Between 10 kb and 100 kb	685	22	0.032	0.028	0.00
Comparison of HiFiasm primary and haploid assemblies
Primary assembly	779	827	46.1	25	99.60
Hap 1_assembly	879	816	24.4	8.9	98.80
Hap 2_assembly	363	776	14.3	5.4	97.90
Hap 1 >1 Mb	96	736	16.4	6.8	96.70
Hap 2 >1 Mb	72	766	24.5	12.3	98.10