Table 3.

HiFiasm contigs ( 1 Mb) covering each of the Hi‐C pseudo‐molecules

Macadamia jansenii HiC pseudo‐molecules (A)	Size of HiC pseudo‐molecules (B)	HiFiasm contigs corresponding to HiC scaffolds (C)	HiFiasm contigs length (with explanation) (D)	HiFiasm combined contigs length (E)	Extra HiFiasm length (HiFiasm contig length − HiC scaffold length) (E − B)
Chr 1	67 682 215	ptg000016l	71 93 5981	71 935 981	4 253 766
Chr 2	63 669 590	ptg000006I + ptg000025I + ptg000010I	74 041 379 (=25 189 511 + 2 713 795 + 46 138 073)	74 041 379	10 371 789
Chr 3	58 143 993	ptg000021I + ptg000009l + ptg000022I	59 310 972 (=13 354 688 + 39 279 660 + 6 676 624)	59 310 972	1 166 979
Chr 4	56 076 407	ptg000017l	57 081 251	57 081 251	1 004 844
Chr 5	5 522 0784	ptg000011l	56 513 637	56 513 637	1 292 853
Chr 6	53 595 462	ptg000003l	57 251 071	57 251 071	3 655 609
Chr 7	52 077 970	ptg000019I + ptg000020I +ptg000033l + ptg000007I	54 758 790 (=8 098 418 + 22 399 594 + 1 122 141 + 23 138 637)	54 758 790	2 680 820
Chr 8	49 563 658	ptg000013I + ptg000002l	5 223 9994 (=22 539 440 + 29 700 554)	52 239 994	2 676 336
Chr 9	49 085 581	ptg000014l + ptg000005	4 917 6982 (=43 049 961 + 6 127 021)	49 176 982	91 401
Chr 10	48 974 653	ptg000004l	4 986 3231	49 863 231	888 578
Chr 11	47 698 009	ptg000012l	4 832 0516	48 320 516	622 507
Chr 12	46 713 600	ptg000001l + ptg000072I + ptg000052I	51 378 064 (=26 771 894 + 4 271 045 + 20 335 125)	51 378 064	4 664 464
Chr 13	45 610 911	ptg000023l	47 997 562	47 997 562	23 86 651
Chr 14	45 288 529	ptg000008l	46 131 124	46 131 124	842 595