Table 4.
Presence of telomere repeats and rRNA at the ends of HiFiasm contigs
| Hi‐C pseudo‐molecule | HiFiasm contigs | Terminal 1 (HiFiasm contig) | Terminal 2 (HiFiasm contig) |
|---|---|---|---|
| Hi‐C pseudo‐molecules covered by a single HiFiasm contig | |||
| Chr 1 | ptg000016l | Telomere | 18S rRNA |
| Chr 4 | ptg000017l | Telomere | Telomere |
| Chr 5 | ptg000011l | Telomere | 18S rRNA |
| Chr 6 | ptg000003l | Telomere | Telomere |
| Chr 10 | ptg000004l | Telomere | Telomere |
| Chr 11 | ptg000012l | Telomere | Telomere |
| Chr 13 | ptg000023l | Telomere | Telomere |
| Chr 14 | ptg000008l | Telomere | Telomere |
| Hi‐C pseudo‐molecules covered by more than one HiFiasm contig | |||
| Chr 2 | ptg000006I | – | Telomere |
| ptg000025I | – | 28S rRNA | |
| ptg000010I | 18S rRNA | 28S rRNA | |
| Chr 3 | ptg000021I | – | Telomere |
| ptg000009I | – | – | |
| ptg000022I | – | Telomere | |
| Chr 7 | ptg000019I | – | Telomere |
| ptg000020I | – | – | |
| ptg000033I | – | – | |
| ptg000007I | Telomere | – | |
| Chr 8 | ptg000013I | Telomere | Repeats |
| ptg000002l | Telomere | Repeats | |
| Chr 9 | ptg000014l | Telomere | – |
| ptg000005 | Telomere | – | |
| Chr 12 | ptg000001l | Telomere | – |
| ptg000072I | – | 5S rRNA | |
| ptg000052I | Telomere | 5S rRNA | |