Skip to main content
. Author manuscript; available in PMC: 2022 Dec 2.
Published in final edited form as: Nat Biomed Eng. 2021 Dec 2;5(12):1500–1516. doi: 10.1038/s41551-021-00823-9

Extended Table 3. Substrate specificity of differentially expressed histone methylating genes.

List of differentially expressed (p<0.2) genes between soft and stiff PDMS, as determined by RNAseq, with the GO term association histone methylation (GO:0016571). Shown are substrate specificities for mono (1), di (2), tri (3) or any methylation of the respective target histone residue as obtained from either UniProt or AmiGO database. H3K9 residues were amongst the most prevalent substrates.

Gene Ensembl ID Substrate specificity Source FC p-value
Ehmt1 ENSMUSG00000036893 H3K9me1/2 UniProt 0.847 0.0185
Paxbp1 ENSMUSG00000022974 H3K4me2/3 UniProt 0.751 0.0666
Pwp1 ENSMUSG00000001785 H3K20me3 AmiGO 0.860 0.0797
Setdb1 ENSMUSG00000015697 H3K9me3 UniProt 0.823 0.0830
Rtf1 ENSMUSG00000027304 H3K4me3 UniProt 1.127 0.1119
Setd1a ENSMUSG00000042308 H3K4me UniProt 0.670 0.1190
Setd1b ENSMUSG00000038384 H3K4me UniProt 0.193 0.1573
Eed ENSMUSG00000030619 H3K9me, H3K27me UniProt 0.719 0.1687
Arid4b ENSMUSG00000039219 H3K9me3, H3K20me3 AmiGO 1.158 0.1881