Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2022 Jul 7;9:873923. doi: 10.3389/fmed.2022.873923

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2022 Raghubar, Pham, Tan, Grice, Crawford, Lam, Andersen, Yoon, Teoh, Matigian, Stewart, Francis, Ng, Healy, Combes, Kassianos, Nguyen and Mallett.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

PMC Copyright notice

Mouse ST-seq consensus labels. (A) H&E images of the mouse kidney tissues from three females and three males. (B, C) The functional cortical and medullary regions, which were annotated within the mouse ST-seq datasets by a Consultant Pathologist were mapped to the H&E tissue sections and presented in the UMAP. (D, E) The spatial organization of the KNN clusters was mapped to the H&E tissue images and presented in a UMAP. (F,G) The spatial organization of the consensus-based label transfer results was mapped to the H&E tissue images and presented in a UMAP, respectively. (H) The spatial organization of the deconvoluted functional structures was mapped to the H&E tissue images and presented as simple pie charts to demonstrate the proportions.