TABLE 1.
Virulence factors predicted to be produced by F. covae LSU-066-04 and F. covae LV-359-01 based on previous studies; percent similarities are to F. covae AL-02-36T
| Gene | Reference | Strain(s) used | Flavobacterium species | LSU-066-04 percent similarity; E value; query cover | LV-359-01 percent similarity; E value; query cover |
|---|---|---|---|---|---|
| porV | 13, 14 | C#2 and MS-FC-4 | F. covae and F. columnare | 99.29%; 0.0; 100% | 99.29%; 0.0; 100% |
| gldN | 13, 14 | C#2, IA-S-4, and MS-FC-4 | F. covae, F. columnare, and F. columnare | 98.67%; 0.0; 100% | 98.67%; 0.0; 100% |
| gldK | 13 | C#2 and IA-S-4 | F. covae and F. columnare | 99.78%; 0.0; 100% | 100.00%; 0.0; 100% |
| gldL | 13 | C#2 and IA-S-4 | F. covae and F. columnare | 100.00%; 4e−116; 100% | 100.00%; 4e−116; 100% |
| gldM | 13 | C#2 and IA-S-4 | F. covae and F. columnare | 99.50%; 0.0; 100% | 99.50%; 0.0; 100% |
| sprA | 13 | C#2 and IA-S-4 | F. covae and F. columnare | 99.36%; 0.0; 100% | 99.84%; 0.0; 100% |
| sprE | 13 | C#2 and IA-S-4 | F. covae and F. columnare | 97.44%; 0.0; 100% | 97.18%; 0.0; 100% |
| sprT | 13 | C#2 and IA-S-4 | F. covae and F. columnare | 99.15%; 6e−163; 100% | 99.15%; 6e−163; 100% |
| nirS | 15 | 94-801 | F. covae | 100.00%; 0.0; 100% | 100.00%; 0.0; 100% |
| cylA | 15 | MS-FC-4 | F. columnare | 100.00%; 0.0; 100% | 100.00%; 0.0; 100% |
| C6N29_11540 | 14 | MS-FC-4 | F. columnare | 100.00%; 0.0; 100% | 100.00%; 0.0; 100% |
| C6N29_11545 | 14 | MS-FC-4 | F. columnare | 99.44%; 0.0; 100% | 99.37%; 0.0; 100% |