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. 2022 Jun 22;11:e78653. doi: 10.7554/eLife.78653

Table 1. Predictions of the significance of the c.1424C>G, p.(V465G) KIF22 variant.

Algorithm Prediction
Sorting Intolerant from Tolerant (SIFT) Vaser et al., 2016 Deleterious: score 0.01 with scores ranging from 0 to 1 and scores below 0.05 considered deleterious
Polymorphism Phenotyping (PolyPhen-2) Adzhubei et al., 2010 Benign: score 0.437
MutationTaster Schwarz et al., 2010 Deleterious
Combined Annotation Dependent Depletion (CADD) Rentzsch et al., 2019 Deleterious: scaled C-score 15.3800, with a score of greater than or equal to 10 indicating a deleterious substitution
Deleterious Annotation of Genetic Variants Using Neural Networks (DANN) Quang et al., 2015 Deleterious: score 0.99 with scores ranging from 0 to 1 and higher values indicating a variant is more likely to be deleterious
Rare Exome Variant Ensemble Learner (REVEL) Ioannidis et al., 2016 Benign: score 0.28 with scores ranging from 0 to 1 and scores >0.803 classified as pathogenic