Table 2.
HDAC inhibition and physicochemical properties of full‐sized inhibitors 10 a–c.
|
| |||||||
|---|---|---|---|---|---|---|---|
|
|
R1 |
Physicochemical Properties |
IC50 [nM] |
||||
|
LogD7.4 |
Solubility[a,e] [μg/mL] |
HDAC1[b,e] |
HDAC2[b,e] |
HDAC3[b,e] |
HDAC6[c,e] |
||
|
10 a |
|
3.16 |
0.21±0.03 |
41.8±0.2 |
100.2±2.6 |
>6,666[d] |
>10,000[d] |
|
10 b |
|
2.68 |
1.99±0.04 |
41.1±3.7 |
85.5±11.6 |
>3,333[d] |
>10,000[d] |
|
10 c |
|
2.29 |
7.48±0.33 |
26.2±0.9 |
59.3±7.9 |
16,820±2,515 |
>10,000[d] |
|
VK‐1 |
– |
3.19 |
0.98±0.10 |
68.6±10.4 |
128.2±14.5 |
310.4±7.8 |
>10,000[d] |
|
entinostat |
– |
n.d. |
n.d. |
426.1±58.7 |
354.0±43.1 |
310.5±9.8 |
>10,000[d] |
|
vorinostat |
– |
0.99 |
255±3.71 |
113.0±16.9 |
191.4±15.4 |
109.5±9.7 |
21.7±3.2 |
[a] PBS buffer, pH=7.4; [b] preincubation of enzyme and inhibitor 1 h at 25 °C; [c] preincubation of enzyme and inhibitor 15 min at 25 °C; [d] <25 % inhibition at stated concentration; n.d.: not determined, [e] mean ±SD, at least two independent experiments.