Table 2.
Microorganism | TP (n) [BC+/BCID2+] | FP (n) [BC-/BCID2+] | FN (n) [BC+/BCID2-] | TN (n) [BC-/BCID2-] | SE (%) | 95% CI (%) | SP (%) | 95% CI (%) |
---|---|---|---|---|---|---|---|---|
Staphylococcus spp. | 12a | 0 | 0 | 48 | 100 | 73.5–100 | 100 | 92.6–100 |
S. aureus | 7 | 0 | 0 | 53 | 100 | 59–100 | 100 | 93.3–100 |
S. epidermidis | 3 | 0 | 0 | 57 | 100 | 29.2–100 | 100 | 93.7–100 |
S. lugdunensis | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
Streptococcus spp. | 9b | 0 | 0 | 51 | 100 | 66.4–100 | 100 | 93–100 |
S. agalactiae | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
S. pyogenes | 1 | 0 | 0 | 59 | 100 | 2.5–100 | 100 | 93.9–100 |
S. pneumoniae | 4 | 0 | 0 | 56 | 100 | 39.8–100 | 100 | 93.6–100 |
E. faecalis | 2 | 0 | 0 | 58 | 100 | 15.8–100 | 100 | 93.8–100 |
E. faecium | 1 | 0 | 0 | 59 | 100 | 2.5–100 | 100 | 93.9–100 |
L. monocytogenes | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
Gram positives, overall | 24 | 0 | 0 | 36 | 100 | 85.8–100 | 100 | 90.3–100 |
A. calcoaceticus-baumannii | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
Bacteroides fragilis | 1 | 0 | 0 | 59 | 100 | 2.5–100 | 100 | 93.9–100 |
H. influenzae | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
N. meningitidis | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
P. aeruginosa | 1 | 0 | 0 | 59 | 100 | 2.5–100 | 100 | 93.9–100 |
S. maltophilia | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
Enteric bacteria | 26 | 1c | 0 | 33 | 100 | 86.8–100 | 97.1 | 84.7–99.9 |
E. coli | 23 | 0 | 0 | 37 | 100 | 85.2–100 | 100 | 90.5–100 |
E. cloacae complex | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
K. aerogenes | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
K. oxytoca | 1 | 0 | 0 | 59 | 100 | 2.5–100 | 100 | 93.9–100 |
K. pneumoniae | 1 | 0 | 0 | 59 | 100 | 2.5–100 | 100 | 93.9–100 |
Proteus spp. | 1 | 0 | 0 | 59 | 100 | 2.5–100 | 100 | 93.9–100 |
Salmonella spp. | 1 | 0 | 0 | 59 | 100 | 2.5–100 | 100 | 93.9–100 |
S. marcescens | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
Gram negatives, overall | 28 | 1 | 0 | 31 | 100 | 87.7–100 | 96.9 | 83.8–99.9 |
C. albicans | 1 | 0 | 0 | 59 | 100 | 2.5–100 | 100 | 93.9–100 |
C. auris | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
C. glabrata | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
C. krusei | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
C. parapsilosis | 1 | 0 | 0 | 59 | 100 | 2.5–100 | 100 | 93.9–100 |
C. tropicalis | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
C. neoformans/gattii | 0 | 0 | 0 | 60 | NA | - | 100 | 94.1–100 |
Yeasts, overall | 2 | 0 | 0 | 58 | 100 | 15.8–100 | 100 | 93.8–100 |
TP = True Positives; FP = False Positives; FN = False Negatives; TN = True Negatives; BC = Blood Culture; BCID2 = Blood Culture Identification 2 Panel; SE = Sensitivity; SP = Specificity; CI = Confidence Interval.
Including 2 off-panel species (S. hominis and S. capitis).
Including 4 off-panel species (S. intermedius, S. constellatus, S. group C and S. group D).
This sample grew B. cereus according to traditional methods confirmed by whole genome sequencing.