TABLE 7.
Amino acids that are fixed in all SIG1 copies in a given species or isolate but differ between T. guillardii and T. pseudonana and T. weissflogii isolates from Long Island Sound, Portugal, the South Pacific, and Hawaii.
| Isolate | Amino acids at the following positionsa
|
||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 11 | 14 | 25 | 32 | 37 | 40 | 44 | 47 | 48 | 50 | 54 | 59 | 63 | 67 | 72 | 74 | 75 | 78 | 93 | 94 | 96 | 106 | 116 | 120 | 126 | 127 | 128 | 129 | 133 | 137 | 139 | 140 | 144 | 146 | 147 | 148 | 149 | 150 | 151 | 153 | 154 | 169 | 170 | 173 | 174 | 176 | 184 | ||
| Long Island Sound clone Actin | S | F | A | K | R | A | T | H | I | I | A | L | I | F | S | T | I | A | A | I | N | L | A | K | S | Q | G | E | R | N | F | A | N | H | R | A | — | A | E | V | V | R | D | A | F | H | G | T | V |
| Portugal | . | . | . | . | . | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| South Pacific | . | . | . | . | . | . | . | . | . | V | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Y | R | . | . | A |
| Hawaii | . | . | . | . | . | . | . | . | . | V | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Y | . | . | . | A |
| T. guillardii | . | W | . | M | K | . | S | . | . | V | T | V | T | Y | E | N | . | . | . | A | V | . | V | . | N | . | . | D | . | S | . | . | Q | N | . | . | . | S | T | . | P | . | . | . | . | Y | . | V | S |
| T. pseudonana | P | W | S | . | K | F | A | S | V | V | T | V | T | Y | A | N | L | D | G | G | S | Q | . | N | H | T | — | . | G | . | Y | G | K | L | A | G | R | L | S | I | T | T | N | S | Y | Y | N | V | M |
The positions are numbered relative to the first predicted amino acid of the open reading frame. Lightface roman type indicates conservative changes, italic type indicates moderate changes, and boldface roman type indicates radical changes relative to the reference Long Island Sound clone Actin isolate. A dot indicates that the amino acid is identical to the amino acid in the reference sequence; dashes indicate introduced alignment gaps.