TABLE 1.
Pop | Abbr. | N | # PA | # PA lin. | # mtDNA | π mtDNA | HO | Pop F ST | F IS | F IT | F ROH | β |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Italy | IT | 9 | 118,152 (202) | 188,285 | 68 (23) | 0.0021 (0.0011) | 0.164 (0.002) | 0.058 (0.005) | ‐–.024 (0.012) | 0.014 (0.009) | 0.028 (0.01) | 0.112 (0.007) |
Ionian Islands | IO | 5 | 46,340 | 239,089 (294) | 87 | 0.0021 (0.0013) | 0.16 (0.004) | 0.091 (0.004) | –0.039 (0.027) | 0.019 (0.02) | 0.067 (0.02) | 0.143 (0.041) |
Greece | GR | 10 | 73,108 (220) | 86 (19) | 0.0021 (0.0012) | 0.165 (0.005) | 0.047 (0.003) | –0.02 (0.029) | 0 (0.022) | 0.038 (0.02) | 0.101 (0.008) | |
Aegean Islands | AE | 11 | 79,357 (198) | 81 (18) | 0.0023 (0.0012) | 0.164 (0.01) | 0.038 (0.002) | 0 (0.059) | 0.013 (0.049) | 0.043 (0.03) | 0.092 (0.014) | |
Crete | CT | 11 | 82,202 (177) | 124,440 (129) | 51 (24) | 0.0013 (0.0007) | 0.153 (0.006) | 0.115 (0.005) | –0.018 (0.037) | 0.05 (0.034) | 0.086 (0.04) | 0.165 (0.024) |
Cyprus | CY | 10 | 121,550 (196) | 177,675 (113) | 72 (22) | 0.002 (0.001) | 0.165 (0.008) | 0.061 (0.005) | –0.032 (0.05) | 0.029 (0.039) | 0.04 (0.03) | 0.114 (0.024) |
Israel | IS | 9 | 271,400 (235) | 413,375 | 43 (20) | 0.0013 (0.0007) | 0.175 (0.003) | 0.007 (0.003) | –0.035 (0.016) | 0.027 (0.008) | 0.019 (0.01) | 0.063 (0.012) |
N, number of individuals in the population; #PA, private alleles per population, bootstrapped to the smallest N of 5 individuals; #PA lin., private alleles per lineage of K = 5 identified with sNMF, bootstrapped to the smallest N of 9 individuals; #mtDNA, mitochondrial polymorphic sites per population, bootstrapped to the smallest N of 5 individuals; π mtDNA, mitochondrial nucleotide diversity; H O, observed heterozygosity; F ST, population specific F ST as in Weir and Goudet (2017) bootstrapped over 100 blocks of contiguous SNP; F IS, population level inbreeding coefficient; F IT, mean individual inbreeding coefficient relative to the meta‐population; F ROH, mean inbreeding coefficient estimated from ROH; β, mean pairwise relatedness within population.