TABLE 3.
Differentially abundant bacterial taxa by CaOx stone status
| Organism | Group overrepresented | Indicator value | P value (indicator value) | P value (Wilcoxon rank‐sum tests) |
|---|---|---|---|---|
| Acinetobacter | Cases | 0.69 | .005 | .007 |
| Geobacillus a | Cases | 0.63 | .02 | .03 |
| Geobacillus a | Cases | 0.56 | .004 | .009 |
| Hydrogenophaga | Cases | 0.53 | .04 | .04 |
| Sphingopyxis | Controls | 0.84 | .04 | .15 |
Notes: Indicator value represents the product of the mean relative abundance and frequency of a bacterial taxon by experimental group. Permutation tests are performed to calculate statistical significance to determine the P value for the indicator value. Five taxa were identified that had indicator values >.5 and P values <.05 when differentiating case and control groups. The P values for Wilcoxon rank‐sum tests were then calculated between case and control groups for these taxa.
Two unique ASVs of the Geobacillus genus were identified as differentially abundant.