TABLE 1.
Distribution of subtypes among lots
| Lota | Subtype(s)b recovered within cluster:
|
Nonclustered subtype | ||||
|---|---|---|---|---|---|---|
| B1 | B (not B1) | C | A | |||
| A1-1 | 1d, 1g, 4a | 23b | 43 | |||
| A1-2 | 14a, 14b, 23b | |||||
| A1-3 | 23a, 23b | 39c | ||||
| A2-1 | 20 | |||||
| A2-2 | 4c | |||||
| A2-3 | 4c | 33 | ||||
| A2-4 | 1d | 23b, 27 | ||||
| B1-1 | ||||||
| B1-2 | 25 | |||||
| B1-3 | 1d, 8a, 8b, 8e | |||||
| B1-4 | 1d, 7b, 8b | 31 | ||||
| B2-1 | 5, 6a, 6d | 29a | ||||
| B2-2 | 1b, 1c, 6c, 6d, 8c | 21 | 29a, 38 | |||
| B2-3 | 6b, 6d | 10, 19, 26 | 29a | |||
| B2-4 | 6d | 12, 15 | 30a | 44 | ||
| C1-1 | 1d, 1e, 1f, 4b, 8d, 8e | 11 | 46b | |||
| C1-2 | 33, 41 | 45, 46a, 46b, 46c | ||||
| C1-3 | 1d, 1f, 7a | 46b, 47a | ||||
| C1-4 | 1d, 4a | 16 | 35 | 46b, 47b, 47c | ||
| C2-1 | 8c | 46a, 46b, 46c, 47b | ||||
| C2-2 | 3 | 9a, 13b, 22 | 37a, 37b | |||
| C2-3 | 1a, 3 | 13b | 29b, 39c | |||
| C2-4 | 9b, 13a, 24 | 29c, 28, 34, 36 | ||||
| 39a, 39b, 39c | ||||||
| D1-1 | 1d | 32 | ||||
| D1-2 | 1b | 32 | ||||
| D1-3 | ||||||
| D1-4 | 17 | 42 | ||||
| D2-1 | 39c | |||||
| D2-2 | 1f, 2, 8c | 18 | 33, 40 | |||
| D2-3 | 1f, 8c | 30b, 31 | ||||
For lot designations, the letter indicates the plant, the first number indicates the trip, and the last number indicates the lot.
The subtypes of E. coli O157 recovered from samples within each lot are indicated. Subtypes are grouped according to overall clusters (see Fig. 1).