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. 2022 Jul 12;16:946206. doi: 10.3389/fncel.2022.946206

TABLE 1.

Summary of NIHL susceptible genes and their locus.

Groups of genes Gene Full name Genetic locus References
Antioxidant genes APEX1 Apurinic/Apyrimidinic endodeoxyribonuclease 1 rs1130409, rs1760944 Shen et al., 2016; Ding et al., 2019
ATP2B2
(PMCA2)
ATPase plasma membrane Ca2+ transporting 2 rs1719571, rs3209637, rs14154 Kozel et al., 2002; Li X. et al., 2016; Yan et al., 2013; Zhang S. et al., 2019
CAT Catalase rs769217, rs208679, rs7943316, rs769214, rs475043, rs12273124, rs494024, rs564250 Konings et al., 2007; Xia et al., 2011; Yang et al., 2015; Li T. et al., 2020
GPX1 Glutathione peroxidase 1 rs1987628 Wen et al., 2014; Li J. Y. et al., 2020
GST Glutathione S-transferase rs1695, rs1049055, rs10712361 Lin et al., 2009; Shen et al., 2012; Loukzadeh et al., 2019; Zong et al., 2019; Li Y. H. et al., 2020
NFE2L2 (NRF2) Nuclear factor erythroid 2-related factor 2 rs77684420, rs6726395, rs1962142, rs6721961 Honkura et al., 2016; Wang et al., 2019
NOX3 NADPH Oxidase 3 rs12195525, rs33652818 Lavinsky et al., 2015; Xin et al., 2021
PON2 Paraoxonase 2 rs12026, rs7785846, rs12704796, rs987539, rs7493, rs7786401 Cao et al., 2013; Li X. et al., 2016; Bhatt et al., 2020; Wu et al., 2020; Zhou H. et al., 2020
SOD1 Superoxide dismutase 1 rs2070424, rs10432782 Liu et al., 2010b
SOD2 Superoxide dismutase 2 rs4880, rs2855116 Ohlemiller et al., 1999; Fortunato et al., 2004; Liu et al., 2010a; Wang et al., 2014; Wang J. et al., 2017
Potassium ion cycling related genes KCNQ1 Potassium voltage-gated channel subfamily Q member 1 rs800336, rs2056892, rs2011750, rs2283158, rs2283179, rs2283205, rs231899, rs760419, rs163171, rs8234, rs7945327, rs11022922, rs718579, rs463924 Van Laer et al., 2006; Pawelczyk et al., 2009; Ding et al., 2020
KCNQ4 Potassium voltage-gated channel subfamily Q member 4 rs34287852, rs2769256, rs727146, rs4660468, rs12143503, rs4660470 Van Laer et al., 2006; Pawelczyk et al., 2009; Guo et al., 2018b; Zhou W. H. et al., 2020
KCNE1 Potassium voltage-gated channel subfamily E regulatory subunit 1 rs915539, rs2070358, rs1805127, rs1805128 Van Laer et al., 2006; Ding et al., 2020
KCNJ10 Potassium voltage-gated channel subfamily J member 10 rs1130183, rs1186675 Van Laer et al., 2006; Pawelczyk et al., 2009; Bhatt et al., 2020
KCNMA1 Potassium calcium-activated channel subfamily M alpha 1 rs696211, rs1436089 Konings et al., 2009b; Zhang X. et al., 2019
GJB1 (Cx32) Gap Junction Protein Beta 1 rs747181, rs1997625 Van Laer et al., 2006; Pawelczyk et al., 2009
GJB2 (Cx26) Gap Junction Protein Beta 2 rs3751385, rs5030700, rs137852540 Van Laer et al., 2006; Pawelczyk et al., 2009; Zhou et al., 2016
GJB3 (Cx31) Gap Junction Protein Beta 3 rs476220 Van Laer et al., 2006
GJB4 (Cx30.3) Gap Junction Protein Beta 4 rs1998177, rs755931 Van Laer et al., 2006; Pawelczyk et al., 2009
GJB6 (Cx30) Gap Junction Protein Beta 6 rs945370, rs2065796, rs2065797 Van Laer et al., 2006
SLC12A2 Solute carrier family 12 member 2 rs1962291, rs1560637, rs790153, rs790156, rs10089 Van Laer et al., 2006
Cilia structure related genes CDH23 Cadherin related 23 rs1227049, rs1227051, rs3802711, rs3752752, rs41281334 Yang et al., 2006; Kowalski et al., 2014; Yu et al., 2016; Bhatt et al., 2020; Jiao et al., 2020; Jiang et al., 2021
PCDH15 Protocadherin related 15 rs11004085, rs7095441, rs1100085, rs10825122, rs1930146, rs2384437, rs4540756, rs2384375 Konings et al., 2009b; Xu et al., 2017a,b
MYH14 Myosin heavy chain 14 rs667907, rs588035 Konings et al., 2009b; Fu et al., 2016
Heat shock protein genes 70 HSPA1A Heat shock protein family A member 1A rs1043618, rs1061581 Li et al., 2017
HSPA1B Heat shock protein family A member 1B rs2763979 Konings et al., 2009a; Chang et al., 2011
HSPA1L Heat shock protein family A member 1L rs2075800, rs2227956 Chang et al., 2011; Li Y. H. et al., 2016; Li et al., 2017
DNA damage repair related genes DNMT1 DNA methyltransferase 1 rs2228611 Guo et al., 2018a
DNMT3A DNA methyltransferase 3 alpha rs749131, rs1550117 Guo et al., 2018a
EYA4 EYA transcriptional coactivator and phosphatase 4 rs3777781, rs212769, rs3813346, rs9321402, rs9493627 Zhang et al., 2015; Yang Q. et al., 2016; Yang et al., 2017
OGG1 8-Oxoguanine DNA glycosylase rs1052133 Shen et al., 2014
Apoptosis related genes CASP3 Caspase 3 rs1049216, rs6948 Wu et al., 2017
ERK2
(MAPK1)
Extracellular signal-regulated kinase 2 Null (animal experiment) Kurioka et al., 2015
JNK1
(MAPK8)
C-Jun N-terminal kinases 1 rs11598320, rs8424 Sun et al., 2021
Other NIHL susceptible genes AUTS2 Activator of transcription and developmental regulator rs35075890 Niu et al., 2021
CARD8 Caspase recruitment domain family member 8 rs2043211 Miao et al., 2021
DFNA5
(GSDME)
Gasdermin E rs2521758 Zhang et al., 2015
FAS Fas cell surface death receptor rs1468063, rs2862833 Xu et al., 2021
FOXO3 Forkhead box O3 rs2802292, rs10457180, rs12206094 Guo et al., 2017, Guo et al., 2018c; Jiao et al., 2017
GAPDH Glyceraldehyde-3-phosphate dehydrogenase rs6489721 Wan et al., 2020
GRHL2 Grainyhead like transcription factor 2 rs3735715, rs1981361, rs666026, rs611419 Li X. et al., 2013; Zhang et al., 2015; Xu et al., 2016; Yang Q. Y. et al., 2016; Li X. et al., 2020
GRM7 Glutamate metabotropic receptor 7 rs1485175, rs1920109, rs9826579 Yu et al., 2018a,b
HDAC2 Histone deacetylase 2 rs10499080, rs6568819 Wang et al., 2021
HOTAIR HOX transcript antisense RNA rs4759314 Wang B. et al., 2017
IL-6 Interleukin 6 rs1800795 Braga et al., 2014
ITGA8 Integrin subunit alpha 8 rs10508489 Xia et al., 2011
NCL Nucleolin rs7598759 Grondin et al., 2015
NOTCH1 Notch receptor 1 rs3124594, rs3124603 Ding et al., 2018
NRN1 Neuritin 1 rs3805789 Liu et al., 2021
PER1 Period circadian regulator 1 rs2585405 Chen et al., 2021
POU4F3 POU class 4 homeobox 3 rs1368402, rs891969 Xu et al., 2016
PTPRN2 Protein tyrosine phosphatase receptor type N2 rs10081191 Niu et al., 2021
SIK3 Salt-inducible kinase 3 rs493134, rs6589574, rs7121898 Yin et al., 2020
STAT3 Signal transducer and activator of transcription 3 rs1053005 Gao et al., 2021
TSP Thrombospondin Null (animal experiment) Smeriglio et al., 2019
UBAC2 UBA domain containing 2 rs3825427 Wan et al., 2022
WHRN Whirlin rs12339210 Jiang et al., 2021
XPO5 Exportin 5 rs11077 Wang et al., 2020
XRCC1 X-Ray repair cross complementing 1 rs1799782 Ding et al., 2019