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. 2022 Jul 1;39(7):msac150. doi: 10.1093/molbev/msac150

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© The Author(s) 2022. Published by Oxford University Press on behalf of Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Fig. 7. — Selective sweep in zoonotic C. parvum. (A) Distribution of Pi ratios (IId/IIa) and Fst values calculated in a 10 kb sliding window with 1 kb steps, with the Pi ratio values being logarithmically transformed. Points located to the left (IId genomes) and right tails (IIa genomes) of the empirical Pi ratio distribution (left and right dash lines, respectively) and above the mean Fst value (horizontal dashed line) are considered selected regions. Two examples of regions with strong selective sweep signals in chromosomes 1 (B and C) and 6 (D and E) of the IId genomes are shown. The ML trees were built with SNPs located in selected regions (shaded area) using representative isolates in each group, with the source of the isolates being indicated.