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. 2022 Jun 30;8(7):698. doi: 10.3390/jof8070698

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© 2022 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).

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A maximum likelihood analysis showing the phylogenetic relationships of coffee fungal endophytes. The tree has a total of 167 fungal sequences, of which 61 fungal sequences came from the present study and 106 reference sequences of close relatives came from the GenBank. Mucor circinelloides (NR126116; Mucoraceae; Mucorale; Mucoromycetes) was used as the outgroup taxon. The bootstrap support values (≥50%) are indicated at the nodes. The bold font indicates the type species from the GenBank and data presented in the red font are the isolate code and culture number of the fungal endophytes obtained from the coffee leaves. Fungal isolates are further highlighted in different colors according to the family classification. Images on the right side of the phylogeny tree are the morphotypes of each clade.