FIG 3.
Distribution of genes significantly impacting bacterial fitness during rice colonization. Colonization events on IR64 and Nipponbare rice cultivars were pooled for this analysis. (A) Transposon insertions in genes leading to a 1.5-fold or higher decrease in abundance on roots at a Padj value of <0.05 were identified to be colonization depleted. Those leading to a 1.5-fold or higher abundance were identified to be colonization enriched. (B) Distribution of genes significantly depleted or enriched during rice colonization along COG categories in ratio of total impacted genes.