Table 2.
Reference genome comparison results.
| Sample | Total Reads | Total Mapped | Mutiple Mapped | Uniquely Mapped | Reads Mapped to ‘+’ | Reads Mapped to ‘−’ | Non-Spliced Reads | Reads Mapped in Proper Pairs |
|---|---|---|---|---|---|---|---|---|
| CZ1 | 27,844,844 | 27,433,999 (98.52%) |
857,821 (3.08%) |
26,576,178 (95.44%) |
13,288,453 | 13,287,725 | 26,576,178 | 26,181,602 |
| CZ2 | 64,908,882 | 63,563,985 (97.93%) |
8,423,620 (12.98%) |
55,140,365 (84.95%) |
27,571,051 | 27,569,314 | 55,140,365 | 50,666,474 |
| CZ3 | 31,569,790 | 31,033,431 (98.30%) |
844,243 (2.67%) |
30,189,188 (95.63%) |
15,097,174 | 15,092,014 | 30,189,188 | 29,876,526 |
| CZ4 | 30,683,164 | 30,085,238 (98.05%) |
822,624 (2.68%) |
29,262,614 (95.37%) |
14,633,739 | 14,628,875 | 29,262,614 | 28,974,756 |
| CZ5 | 30,064,744 | 29,597,379 (98.45%) |
977,979 (3.25%) |
28,619,400 (95.19%) |
14,310,590 | 14,308,810 | 28,619,400 | 28,259,990 |