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. 2022 Jun 21;8(7):647. doi: 10.3390/jof8070647

Table 1.

Fungal species and sequences used in phylogenetic analyses of Talaromyces sect. Talaromyces.

Species Strain Locality Substrate ITS BenA CaM RPB2
T. aculeatus (Raper & Fennell) Samson et al., 2011 CBS 289.48 T USA textile KF741995 KF741929 KF741975 MH793099
T. adpressus A.J. Chen et al., 2016 CGMCC 3.18211 T China: Beijing indoor air KU866657 KU866844 KU866741 KU867001
T. alveolaris Guevara-Suarez et al., 2017 CBS 142379 T USA human bronchoalveolar lavage LT558969 LT559086 LT795596 LT795597
T. amazonensis N. Yilmaz et al., 2016 CBS 140373 T Colombia leaf litter KX011509 KX011490 KX011502 MN969186
T. amestolkiae N. Yilmaz et al., 2012 CBS 132696 T South Africa house dust JX315660 JX315623 KF741937 JX315698
T. angelicae S.H. Yu et al., 2013 KACC 46611 T South Korea dried root of Angelica gigas KF183638 KF183640 KJ885259 KX961275
T. annesophieae Houbraken 2017 CBS 142939 T Netherlands soil MF574592 MF590098 MF590104 MN969199
T. apiculatus Samson et al., 2011 CBS 312.59 T Japan soil JN899375 KF741916 KF741950 KM023287
T. argentinensis Jurjević & S.W. Peterson 2019 NRRL 28750 T Ghana soil MH793045 MH792917 MH792981 MH793108
T. aspriconidius B.D. Sun et al., 2020 CBS 141835 T China: Yunnan soil MN864274 MN863343 MN863320 MN863332
T. aurantiacus (J.H. Mill. et al.) Samson et al., 2011 CBS 314.59 T USA soil JN899380 KF741917 KF741951 KX961285
T. aureolinus L. Wang 2021 CGMCC 3.15865 T China: Yunnan soil MK837953 MK837937 MK837945 MK837961
T. australis Visagie et al., 2015 CBS 137102 T Australia soil under pasture KF741991 KF741922 KF741971 KX961284
T. bannicus L. Wang 2021 CGMCC 3.15862 T China: Yunnan soil MK837955 MK837939 MK837947 MK837963
T. beijingensis A.J. Chen et al., 2016 CGMCC 3.18200 T China: Beijing indoor air KU866649 KU866837 KU866733 KU866993
T. brevis B.D. Sun et al., 2020 CBS 141833 T China: Beijing soil MN864269 MN863338 MN863315 MN863328
T. calidicanius (J.L. Chen) Samson et al., 2011 CBS 112002 T China: Taiwan soil JN899319 HQ156944 KF741934 KM023311
T. californicus Jurjević & S.W. Peterson 2019 NRRL 58168 T USA air MH793056 MH792928 MH792992 MH793119
T. cnidii S.H. Yu et al., 2013 KACC 46617 T South Korea dried roots of Cnidium KF183639 KF183641 KJ885266 KM023299
T. coprophilus Guevara-Suarez et al., 2020 CBS 142756 T Spain herbivore dung LT899794 LT898319 LT899776 LT899812
T. cucurbitiradicus L. Su & Y.C. Niu 2018 ACCC 39155 T China: Beijing endophyte from root of Cucurbita moschata KY053254 KY053228 KY053246 n.a.
T. derxii Takada & Udagawa 1988 CBS 412.89 T Japan cultivated soil JN899327 JX494306 KF741959 KM023282
T. dimorphus X.Z. Jiang & L. Wang 2018 CGMCC 3.15692 T China: Hainan forest soil KY007095 KY007111 KY007103 KY112593
T. domesticus Jurjević & S.W. Peterson 2019 NRRL 58121 T USA floor swab MH793055 MH792927 MH792991 MH793118
T. duclauxii (Delacr.) Samson et al., 2011 CBS 322.48 T France canvas JN899342 JX091384 KF741955 JN121491
T. euchlorocarpius Yaguchi et al., 1999 CBM PF1203 T Japan soil AB176617 KJ865733 KJ885271 KM023303
T. flavovirens (Durieu & Mont.) Visagie et al., 2012 CBS 102801 T Spain unknown JN899392 JX091376 KF741933 KX961283
T. flavus (Klöcker) Stolk & Samson 1972 CBS 310.38 T New Zealand unknown JN899360 JX494302 KF741949 JF417426
T. francoae N. Yilmaz et al., 2016 CBS 113134 T Colombia leaf litter KX011510 KX011489 KX011501 MN969188
T. funiculosus (Thom) Samson et al., 2011 CBS 272.86 T India Lagenaria vulgaris JN899377 MN969408 KF741945 KM023293
T. fuscoviridis Visagie et al., 2015 CBS 193.69 T Netherlands soil KF741979 KF741912 KF741942 MN969156
T. fusiformis A.J. Chen et al., 2016 CGMCC 3.18210 T China: Beijing indoor air KU866656 KU866843 KU866740 KU867000
T. galapagensis Samson & Mahoney 1977 CBS 751.74 T Ecuador soil under Maytenus obovata JN899358 JX091388 KF741966 KX961280
T. ginkgonis X.C. Wang & W.Y. Zhuang sp. nov. 10725 T China: Sichuan rotten fruit of Ginkgo biloba OL638158 OL689844 OL689846 OL689848
T. haitouensis L. Wang 2022 CGMCC 3.16101 T China: Jiangsu riverside soil MZ045695 MZ054634 MZ054637 MZ054631
T. indigoticus Takada & Udagawa 1993 CBS 100534 T Japan soil JN899331 JX494308 KF741931 KX961278
T. intermedius (Apinis) Stolk & Samson 1972 CBS 152.65 T UK swamp soil JN899332 JX091387 KJ885290 KX961282
T. kabodanensis Houbraken et al., 2016 CBS 139564 T Iran hypersaline soil KP851981 KP851986 KP851995 MN969190
T. kendrickii Visagie et al., 2015 CBS 136666 T Canada forest soil KF741987 KF741921 KF741967 MN969158
T. lentulus X.Z. Jiang & L. Wang 2018 CGMCC 3.15689 T China: Shandong soil KY007088 KY007104 KY007096 KY112586
T. liani (Kamyschko) N. Yilmaz et al., 2014 CBS 225.66 T China soil JN899395 JX091380 KJ885257 KX961277
T. louisianensis Jurjević & S.W. Peterson 2019 NRRL 35823 T USA air MH793052 MH792924 MH792988 MH793115
T. macrosporus (Stolk & Samson) Frisvad et al., 1990 CBS 317.63 T South Africa apple juice JN899333 JX091382 KF741952 KM023292
T. mae X.Z. Jiang & L. Wang 2018 CGMCC 3.15690 T China: Shanghai forest soil KY007090 KY007106 KY007098 KY112588
T. malicola Jurjević & S.W. Peterson 2019 NRRL 3724 T Italy rhizosphere of an apple tree MH909513 MH909406 MH909459 MH909567
T. mangshanicus X.C. Wang & W.Y. Zhuang 2016 CGMCC 3.18013 T China: Hunan soil KX447531 KX447530 KX447528 KX447527
T. marneffei (Segretain et al.) Samson et al., 2011 CBS 388.87 T Vietnam Rhizomys sinensis JN899344 JX091389 KF741958 KM023283
T. muroii Yaguchi et al., 1994 CBS 756.96 T China: Taiwan soil MN431394 KJ865727 KJ885274 KX961276
T. mycothecae R.N. Barbosa et al., 2018 CBS 142494 T Brazil nest of Melipona scutellaris MF278326 LT855561 LT855564 LT855567
T. nanjingensis X.R. Sun et al., 2022 CCTCC M 2012167 T China: Jiangsu rhizosphere soil of Pinus massoniana MW130720 MW147759 MW147760 MW147762
T. neofusisporus L. Wang 2016 CGMCC 3.15415 T China: Tibet leaf sample KP765385 KP765381 KP765383 MN969165
T. oumae-annae Visagie et al., 2014 CBS 138208 T South Africa house dust KJ775720 KJ775213 KJ775425 KX961281
T. panamensis (Samson et al.) Samson et al., 2011 CBS 128.89 T Panama soil JN899362 HQ156948 KF741936 KM023284
T. penicillioides L. Wang 2021 CGMCC 3.15822 T China: Guizhou soil MK837956 MK837940 MK837948 MK837964
T. pinophilus (Hedgc.) Samson et al., 2011 CBS 631.66 T France PVC JN899382 JX091381 KF741964 KM023291
T. pratensis Jurjević & S.W. Peterson 2019 NRRL 62170 T USA effluent of water treatment plant MH793075 MH792948 MH793012 MH793139
T. primulinus (Pitt) Samson et al., 2011 CBS 321.48 T USA unknown JN899317 JX494305 KF741954 KM023294
T. pseudofuniculosus Guevara-Suarez et al., 2020 CBS 143041 T Spain herbivore dung LT899796 LT898323 LT899778 LT899814
T. purgamentorum N. Yilmaz et al., 2016 CBS 113145 T Colombia leaf litter KX011504 KX011487 KX011500 MN969189
T. purpureogenus (Stoll) Samson et al., 2011 CBS 286.36 T unknown unknown JN899372 JX315639 KF741947 JX315709
T. qii L. Wang 2016 CGMCC 3.15414 T China: Tibet leaf sample KP765384 KP765380 KP765382 MN969164
T. rapidus Guevara-Suarez et al., 2017 CBS 142382 T USA human bronchoalveolar lavage LT558970 LT559087 LT795600 LT795601
T. rosarhiza H. Zhang & Y.L. Jiang 2021 GUCC 190040.1 T China: Guizhou endophyte of Rosa roxburghii MZ221603 MZ333143 MZ333137 MZ333141
T. ruber (Stoll) N. Yilmaz et al., 2012 CBS 132704 T UK aircraft fuel tank JX315662 JX315629 KF741938 JX315700
T. rubicundus (J.H. Mill. et al.) Samson et al., 2011 CBS 342.59 T USA soil JN899384 JX494309 KF741956 KM023296
T. rufus B.D. Sun et al., 2020 CBS 141834 T China: Yunnan soil MN864272 MN863341 MN863318 MN863331
T. sayulitensis Visagie et al., 2014 CBS 138204 T Mexico house dust KJ775713 KJ775206 KJ775422 MN969146
T. shilinensis X.C. Wang & W.Y. Zhuang sp. nov. XCW_SN259 T China: Yunnan associated with Pseudocosmospora sp. OL638159 OL689845 OL689847 OL689849
T. siamensis (Manoch & C. Ramírez) Samson et al., 2011 CBS 475.88 T Thailand forest soil JN899385 JX091379 KF741960 KM023279
T. soli Jurjević & S.W. Peterson 2019 NRRL 62165 T USA soil MH793074 MH792947 MH793011 MH793138
T. sparsus L. Wang 2021 CGMCC 3.16003 T China: Beijing soil MT077182 MT083924 MT083925 MT083926
T. stellenboschiensis Visagie & K. Jacobs 2015 CBS 135665 T South Africa soil JX091471 JX091605 JX140683 MN969157
T. stipitatus (Thom) C.R. Benj. 1955 CBS 375.48 T USA rotting wood JN899348 KM111288 KF741957 KM023280
T. stollii N. Yilmaz et al., 2012 CBS 408.93 T Netherlands AIDS patient JX315674 JX315633 JX315646 JX315712
T. striatoconidium (R.F. Castañeda & W. Gams) Houbraken et al., 2020 CBS 550.89 T Cuba leaf litter of Pachyanthus poirettii MN431418 MN969441 MN969360 MT156347
T. thailandensis Manoch et al., 2013 CBS 133147 T Thailand forest soil JX898041 JX494294 KF741940 KM023307
T. tumuli Jurjević & S.W. Peterson 2019 NRRL 62151 T USA soil from prairie MH793071 MH792944 MH793008 MH793135
T. veerkampii Visagie et al., 2015 CBS 500.78 T Columbia soil KF741984 KF741918 KF741961 KX961279
T. verruculosus (Peyronel) Samson et al., 2011 NRRL 1050 T USA soil KF741994 KF741928 KF741944 KM023306
T. versatilis Bridge & Buddie 2013 IMI 134755 T UK unknown MN431395 MN969412 MN969319 MN969161
T. viridis (Stolk & G.F. Orr) Arx 1987 CBS 114.72 T Australia soil AF285782 JX494310 KF741935 JN121430
T. viridulus Samson et al., 2011 CBS 252.87 T Australia soil JN899314 JX091385 KF741943 JF417422
T. wushanicus X.C. Wang & W.Y. Zhuang 2021 CGMCC 3.20481 T China: Chongqing soil MZ356356 MZ361347 MZ361354 MZ361361
T. xishaensis X.C. Wang et al., 2016 CGMCC 3.17995 T China: Hainan soil KU644580 KU644581 KU644582 MZ361364
T. yunnanensis Doilom & C.F. Liao 2020 KUMCC 18-0208 T China: Yunnan rhizosphere soil MT152339 MT161683 MT178251 n.a.
T. zhenhaiensis L. Wang 2022 CGMCC 3.16102 T China: Zhejiang mudflat soil MZ045697 MZ054636 MZ054639 MZ054633
T. trachyspermus (Shear) Stolk & Samson 1973 CBS 373.48 T USA unknown JN899354 KF114803 KJ885281 JF417432

GenBank accession numbers in bold indicating the newly generated sequences. Full names of the culture collection centers: ACCC (Agricultural Culture Collection of China); CBS (Centraalbureau voor Schimmelcultures, now Westerdijk Fungal Biodiversity Institute); CCTCC (China Center for Type Culture Collection); CGMCC (China General Microbiological Culture Collection); GUCC (Culture Collection at Department of Plant Pathology, Agriculture College, Guizhou University); IMI (CABI Bioscience); KACC (Korean Agricultural Culture Collection); KUMCC (Kunming Institute of Botany Culture Collection); NRRL (USDA-ARS Culture Collection).