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. 2022 Jun 30;14(7):1445. doi: 10.3390/v14071445

Figure 3.

Figure 3

Maximum likelihood tree of CHIKV-Asian lineage. The unrooted tree was constructed using reference genomes of CHIKV-Asian lineage. Sequences from Brazil are indicated in blue. Sequences from Caribbean countries are in green color and sequences from South Asia/Oceania are in red color. The cluster composed by Caribbean sequences plus almost all Brazilian sequences is labeled. The Brazilian sequence related with a Philippine sequence is highlighted. The branch support is indicated by a color scale of 0 to 1, and is based on the Shimodaira–Hasegawa-like test. The tree was inferred using the TN-93 model plus gamma correction. Horizontal bar indicates the nucleotide substitution per base. For better visualization of the tree some sequences were collapsed (blue triangles).