TABLE 3.
Kinetic constants for exo-β-d-galactofuranosidase-catalyzed hydrolysis of substratesa
| Substrate | Km (mM) | kcat (s−1) | kcat/Km (M−1 s−1) |
|---|---|---|---|
| pP2GMii | 0.80 | 14 | 1.7 × 104 |
| pP25GMii | >1.5 | ND | 1.7 × 103b |
| β-d-Galf(5,6) | 0.10 | 41 | 4.1 × 105 |
| β-d-Galf(3,4) | 0.25 | 43 | 1.7 × 105 |
| 1-O-Methyl-β-Galf | 2.6 | 29 | 1.1 × 104 |
Abbreviations: β-Galf(5,6), mixture of penta- and hexa-β-(1→5)-d-galactofuranooligosaccharides with a DP of 5.5; β-d-Galf(3,4), mixture of tri- and tetra-β-d-(1,5)-galactofuranooligosaccharides with a DP of 3.4; 1-O-Methyl-β-Galf, 1-O-methyl-β-d-galactofuranoside. ND, not determined. The concentration of nonreducing terminal galactofuranosyl residues in pPxGMii was calculated based on the percentage of galactofuranosyl in the total carbohydrate of the polymer and the ratio of total galactose to nonreducing terminal galactofuranosyl residues. The enzyme activities were referenced to 25 U mg−1 with 1-O-methyl-β-d-galactofuranoside as a substrate. Apparent Km and kcat were determined from Cornish-Bowden–Wharton plots (11). The kcat was calculated based on an enzyme molecular mass of 70 kDa.
The kcat/Km for the exo-βd-galactofuranosidase-catalyzed depolymerization of pP25GMii was estimated from the slope of the first order region of the curve for the initial velocity versus the nonreducing terminal galactofuranosyl-pP25GMii concentration.