Table 5.
Knockout (KO) genes of Saccharomyces cerevisiae.
| KO | Gene KO | Gene KO (standard name) and chromosomic locations |
|---|---|---|
| 4 | YDL171C, YPL061W, YPR160W, YPR127W | GLT1 (IV), ALD6 (XVI), GPH1 (XVI), YPR127W |
| 4 | YBR221C, YDL171C, YPL061W, YPR160W | PDB1 (II), GLT1 (IV), ALD6 (XVI), GPH1 (XVI) |
| 4 | YDL171C, YGR193C, YPL061W, YPR160W | GLT1 (IV), PDX1 (VIII), ALD6 (XVI), GPH1 (XVI) |
| 4 | YDL171C, YNL071W, YPL061W, YPR160W | GLT1 (IV), LAT1 (XIV), ALD6 (XVI), GPH1 (XVI) |
| 4 | YDL171C, YER178W, YPL061W, YPR160W | GLT1 (IV), PDA1 (V), ALD6 (XVI), GPH1 (XVI) |
| 4 | YDL171C, YHR002W, YPL061W, YPR160W | GLT1 (IV), LEU5 (VIII), ALD6 (XVI), GPH1 (XVI) |
| 9 | YDL171C, YHR144C, YJR105W, YLR209C, YNL071W, YNL169C, YOR175C, YPL061W, YPR160W | GLT1 (IV), DCD1 (XII), ADO1 (X), PNP1 (XII), LAT1 (XIV), PSD1(XIV), ALE1 (XV), ALD6 (XVI), GPH1 (XVI) |
Note: For each strain in rows, the number of silenced (KO) genes are reported in column 1, names of KO genes are reported in column 2, and the chromosomes they belong to are indicated in column 3 by a roman number (note that the budding yeast S. cerevisiae has a 16‐chromosome organization). In column 2, from left to right, the acronym provides a description of the genes, where Y indicates yeast's unknown sequence, the second letter represents the chromosome, the third letter indicates the left or right arm of the chromosome, the number indicates the sequence of the open‐reading frame (ORF), and the last letter W or C represents Watson (5′ → 3′) or Crick strand, respectively. Column 3 shows that the standard name of a gene is composed of three letters followed by a number and a roman number written in brackets indicating the chromosome it belongs to, the final letter if an uppercase character indicates a dominant gene, while if it is a lowercase character, it indicates a recessive gene.