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. 2022 Jul 19;23(14):7964. doi: 10.3390/ijms23147964

Table 2.

Human putative interactions in this study (hmsLRI) that are found within experimentally determined human interactions datasets in neural cells. The numbers of hmsLRI represented within the indicated datasets of interactions are indicated, together with the percentage of total hmsLRI (7698, Table 1) represented by these numbers. (*) interactions represented within more than one study were counted only once. CP, cortical plates; GZ, germinal zone; DPC, dorsolateral prefrontal cortex; NPC, neural progenitor cells; PFC, prefrontal cortex; TC, temporal cortex; CB, cerebellum; RG, radial glia; IPC, intermediate progenitor cell; EN, excitatory neurons; IN, interneurons; mgHC, mid-gestational human cortex.

Cells Origin N of hmsLRI
Represented
% of hmsLRI
Represented
Study
Hi-C derived CP and GZ of fetal brain 1531 20.67% [15]
Hi-C interactions for
DPC, NPC, Hippocampus
1893 24.59% [17]
HiC-derived enhancer–promoter
linkages of PFC, TC, CB
627 8.14% [14]
HiC loops associated with pro-
moter regions of PFC, TC, CB
788 10.24% [14]
PLAC-seq derived interactions of
RG, IPC, EN, and IN from mgHC
2214 28.76% [18]
TOTAL (*) 3950 51.31%