Table 1.
The annotation of HERV related ncRNAs in human.
| Chromosome | Start | End | HERVname | Strand | Related-ncRNA |
|---|---|---|---|---|---|
| 1 | 22997488 | 23002547 | Homo_sapiens_1_23000272-23002212-HERVHF | − | NONHSAG057580.1 |
| 1 | 43087974 | 43091095 | Homo_sapiens_1_43087972-43089561-HERVHF | + | NONHSAG056389.1 |
| 1 | 68386003 | 68391994 | Homo_sapiens_1_68388791-68390135-HERVHF | + | NONHSAG001773.3 |
| 1 | 82354581 | 82360561 | Homo_sapiens_1_82356924-82357985-HERVHF | − | ENSG00000233290 |
| 1 | 82955299 | 82961592 | Homo_sapiens_1_82956772-82959208-HERVHF | + | ENSG00000230817 |
| 1 | 209451675 | 209454012 | Homo_sapiens_1_209451456-209452546-HERVHF | + | NONHSAG057153.1 |
| 1 | 224840009 | 224846095 | Homo_sapiens_1_224842067-224843662-HERVHF | − | ENSG00000286719 |
| 1 | 228942542 | 228942868 | Homo_sapiens_1_228948757-228950104-HERVHF | + | NONHSAG057288.1 |
| 1 | 232120241 | 232123943 | Homo_sapiens_1_232120704-232121847-HERVHF | + | NONHSAG004630.2 |
| 1 | 241433890 | 241439885 | Homo_sapiens_1_241436435-241438237-HERVHF | + | ENSG00000287516 |
| 2 | 5000768 | 5003355 | Homo_sapiens_2_5003505-5005037-HERVHF | + | NONHSAG077068.1 |
| 2 | 16791950 | 16797713 | Homo_sapiens_2_16793801-16795145-HERVHF | − | NONHSAG078497.1 |
| 2 | 34789818 | 34796058 | Homo_sapiens_2_34792231-34793755-HERVHF | + | NONHSAG077257.1 |
| 2 | 38080800 | 38086513 | Homo_sapiens_2_38082627-38083973-HERVHF | − | ENSG00000138061 |
| 2 | 67333734 | 67337603 | Homo_sapiens_2_67334137-67335887-HERVHF | + | NONHSAG028042.3 |
| 2 | 69789900 | 69795859 | Homo_sapiens_2_69792965-69796021-HUERSP | − | NONHSAG028084.2 |
| 2 | 77965137 | 77970868 | Homo_sapiens_2_77967627-77968976-HERVHF | + | NONHSAG077496.1 |
| 2 | 192506078 | 192513184 | Homo_sapiens_2_192509946-192511342-HERVHF | + | NONHSAG030125.2 |
| 2 | 215922303 | 215928129 | Homo_sapiens_2_215924899-215926434-HERVHF | + | NONHSAG078151.1 |
| 2 | 224225331 | 224230988 | Homo_sapiens_2_224227814-224229160-HERVHF | + | NONHSAG078214.1 |
| 2 | 237606784 | 237611630 | Homo_sapiens_2_237609479-237610820-HERVHF | + | NONHSAG110040.1 |
| 3 | 21189031 | 21194139 | Homo_sapiens_3_21190643-21192440-HERVHF | − | ENSG00000282987 |
| 3 | 54634482 | 54638068 | Homo_sapiens_3_54636349-54637755-HERVHF | − | ENSG00000265992 |
| 3 | 112418410 | 112423366 | Homo_sapiens_3_112419312-112420768-HERVHF | − | NONHSAG035734.2 |
| 3 | 115798715 | 115799166 | Homo_sapiens_3_115795176-115796709-HERVHF | − | NONHSAG085690.1 |
| 3 | 155274423 | 155278762 | Homo_sapiens_3_155276457-155278448-HERVHF | − | NONHSAG036456.2 |
| 3 | 186660747 | 186663692 | Homo_sapiens_3_186660542-186661888-HERVHF | + | ENSG00000113905 |
| 4 | 3927445 | 3930682 | Homo_sapiens_4_3929901-3931242-HERVHF | + | NONHSAG087348.2 |
| 4 | 17000545 | 17003928 | Homo_sapiens_4_17000127-17001778-HERVHF | + | NONHSAG037572.2 |
| 4 | 24500975 | 24501427 | Homo_sapiens_4_24503534-24505060-HERVHF | + | NONHSAG037630.2 |
| 4 | 27974874 | 27981319 | Homo_sapiens_4_27976550-27977552-HERVHF | + | NONHSAG037691.2 |
| 4 | 92271492 | 92275299 | Homo_sapiens_4_92273363-92274770-HERVHF | − | ENSG00000249152 |
| 4 | 103553770 | 103557353 | Homo_sapiens_4_103555460-103556971-HERVHF | − | ENSG00000250920 |
| 4 | 128640901 | 128644450 | Homo_sapiens_4_128642726-128644003-HERVHF | − | NONHSAG088517.2 |
| 4 | 145698823 | 145703505 | Homo_sapiens_4_145701612-145702617-HERVHF | + | ENSG00000237136 |
| 4 | 152741345 | 152747172 | Homo_sapiens_4_152743196-152744540-HERVHF | − | NONHSAG039129.2 |
| 4 | 175461163 | 175467003 | Homo_sapiens_4_175463047-175464647-HERVHF | − | ENSG00000249945 |
| 5 | 92826033 | 92829706 | Homo_sapiens_5_92826486-92827829-HERVHF | + | ENSG00000248588 |
| 5 | 136303790 | 136307028 | Homo_sapiens_5_136303833-136305180-HERVHF | + | ENSG00000250947 |
| 5 | 161245405 | 161254586 | Homo_sapiens_5_161251016-161252646-HERVHF | + | NONHSAG090654.1 |
| 6 | 16259010 | 16264893 | Homo_sapiens_6_16260854-16262201-HERVHF | − | ENSG00000282024 |
| 6 | 18754142 | 18756902 | Homo_sapiens_6_18755932-18757277-HERVHF | − | NONHSAG043117.2 |
| 6 | 80509795 | 80515805 | Homo_sapiens_6_80511941-80513513-HERVHF | − | NONHSAG113295.1 |
| 6 | 94553917 | 94559610 | Homo_sapiens_6_94555806-94557152-HERVHF | − | NONHSAG044390.2 |
| 6 | 97779489 | 97785327 | Homo_sapiens_6_97782122-97783636-HERVHF | + | ENSG00000271860 |
| 6 | 123582333 | 123588007 | Homo_sapiens_6_123584156-123585562-HERVHF | − | ENSG00000186439 |
| 6 | 125701846 | 125707764 | Homo_sapiens_6_125703727-125705069-HERVHF | − | ENSG00000237742 |
| 6 | 126851224 | 126854456 | Homo_sapiens_6_126851273-126852794-HERVHF | + | NONHSAG044785.3 |
| 6 | 131295347 | 131301206 | Homo_sapiens_6_131297975-131299503-HERVHF | + | NONHSAG093612.2 |
| 6 | 131338799 | 131344566 | Homo_sapiens_6_131340338-131342739-HERVHF | + | NONHSAG093612.2 |
| 6 | 131903830 | 131907420 | Homo_sapiens_6_131904209-131905555-HERVHF | + | ENSG00000236673 |
| 6 | 144923164 | 144928866 | Homo_sapiens_6_144925698-144927040-HERVHF | + | NONHSAG095837.2 |
| 7 | 26024199 | 26029809 | Homo_sapiens_7_26026061-26027405-HERVHF | − | NONHSAG047156.2 |
| 7 | 34300132 | 34300573 | Homo_sapiens_7_34301985-34303122-HERVHF | − | NONHSAG047318.2 |
| 7 | 102975230 | 102978736 | Homo_sapiens_7_102976263-102977254-HERVHF | + | ENSG00000230257 |
| 7 | 125920130 | 125924112 | Homo_sapiens_7_125920071-125921895-HERVHF | + | ENSG00000197462 |
| 7 | 155238821 | 155244070 | Homo_sapiens_7_155240740-155241657-HERVK | − | NONHSAG049243.2 |
| 8 | 71676972 | 71680514 | Homo_sapiens_8_71677433-71678968-HERVHF | + | ENSG00000254277 |
| 8 | 90090224 | 90093794 | Homo_sapiens_8_90091914-90093348-HERVHF | − | ENSG00000104327 |
| 8 | 97200769 | 97206658 | Homo_sapiens_8_97202388-97204973-HERVHF | + | NONHSAG098987.1 |
| 8 | 114284546 | 114287727 | Homo_sapiens_8_114284508-114286044-HERVHF | + | ENSG00000254339 |
| 8 | 132080235 | 132086002 | Homo_sapiens_8_132081909-132083445-HERVHF | − | ENSG00000132297 |
| 9 | 12950832 | 12954130 | Homo_sapiens_9_12950845-12952399-HERVHF | + | NONHSAG101172.2 |
| 9 | 80137297 | 80143055 | Homo_sapiens_9_80139873-80141469-HERVHF | + | NONHSAG052646.2 |
| 9 | 85461120 | 85466955 | Homo_sapiens_9_85461166-85462902-HERVHF | + | NONHSAG052703.2 |
| 9 | 115475420 | 115478923 | Homo_sapiens_9_115475976-115477349-HERVHF | + | NONHSAG053288.3 |
| 10 | 6797081 | 6802954 | Homo_sapiens_10_6798770-6800364-HERVHF | − | NONHSAG005151.3 |
| 10 | 25716420 | 25722928 | Homo_sapiens_10_25718978-25720776-HERVHF | + | ENSG00000280809 |
| 11 | 6366039 | 6371662 | Homo_sapiens_11_6368276-6369885-HERVHF | + | NONHSAG007525.2 |
| 11 | 27629072 | 27632889 | Homo_sapiens_11_27630864-27632291-HERVHF | − | ENSG00000254934 |
| 11 | 94641661 | 94647315 | Homo_sapiens_11_94644134-94645475-HERVHF | + | ENSG00000255666 |
| 11 | 96499960 | 96506627 | Homo_sapiens_11_96501724-96503654-HERVHF | + | ENSG00000183340 |
| 11 | 96590439 | 96593677 | Homo_sapiens_11_96590449-96591982-HERVHF | + | ENSG00000254587 |
| 11 | 130565609 | 130570121 | Homo_sapiens_11_130566060-130567548-HERVHF | − | NONHSAG010050.2 |
| 11 | 130753494 | 130756702 | Homo_sapiens_11_130755373-130756704-HERVHF | − | NONHSAG010050.2 |
| 12 | 4018623 | 4023691 | Homo_sapiens_12_4021109-4022208-HERVHF | + | ENSG00000256969 |
| 12 | 11462168 | 11468022 | Homo_sapiens_12_11463877-11465381-HERVHF | − | ENSG00000121335 |
| 12 | 34269097 | 34274242 | Homo_sapiens_12_34268101-34269869-HERVHF | + | NONHSAG010874.2 |
| 12 | 70444894 | 70450107 | Homo_sapiens_12_70446553-70447732-HERVK | − | NONHSAG011664.2 |
| 12 | 86941530 | 86944748 | Homo_sapiens_12_86941432-86943069-HERVHF | + | NONHSAG064903.1 |
| 13 | 42868001 | 42871007 | Homo_sapiens_13_42869513-42870545-HERVHF | − | NONHSAG013351.2 |
| 13 | 48866771 | 48872457 | Homo_sapiens_13_48868391-48870330-HERVHF | − | NONHSAG067525.1 |
| 13 | 51169866 | 51175008 | Homo_sapiens_13_51172521-51173517-HERVHF | + | NONHSAG013541.3 |
| 13 | 54127417 | 54133159 | Homo_sapiens_13_54129305-54130960-HERVHF | − | ENSG00000234787 |
| 13 | 66142250 | 66147037 | Homo_sapiens_13_66143157-66144503-HERVHF | − | NONHSAG013698.2 |
| 13 | 79276611 | 79279830 | Homo_sapiens_13_79276654-79278001-HERVHF | + | NONHSAG067153.1 |
| 14 | 38193319 | 38196529 | Homo_sapiens_14_38193317-38194783-HERVHF | + | ENSG00000258649 |
| 14 | 41521426 | 41521883 | Homo_sapiens_14_41518469-41520184-HERVHF | + | NONHSAG014802.2 |
| 14 | 48262389 | 48263146 | Homo_sapiens_14_48256895-48258584-HERVHF | − | ENSG00000287492 |
| 15 | 74354141 | 74359786 | Homo_sapiens_15_74355867-74357936-HERVHF | + | ENSG00000260266 |
| 15 | 87831107 | 87837024 | Homo_sapiens_15_87833731-87835137-HERVHF | + | NONHSAG017784.2 |
| 16 | 60078536 | 60084582 | Homo_sapiens_16_60081354-60082700-HERVHF | + | NONHSAG071739.1 |
| 16 | 65229803 | 65233421 | Homo_sapiens_16_65231504-65233039-HERVHF | − | ENSG00000260834 |
| 18 | 28693028 | 28696068 | Homo_sapiens_18_28694974-28696314-HERVHF | − | NONHSAG075074.1 |
| 18 | 56417745 | 56421344 | Homo_sapiens_18_56418118-56419466-HERVHF | + | NONHSAG074828.1 |
| 18 | 57064647 | 57070296 | Homo_sapiens_18_57068491-57069834-HERVHF | − | ENSG00000258609 |
| 18 | 73327171 | 73330369 | Homo_sapiens_18_73327166-73328509-HERVHF | + | ENSG00000261780 |
| 19 | 22568269 | 22575022 | Homo_sapiens_19_22570768-22572352-HERVHF | + | NONHSAG025320.2 |
| 20 | 12756027 | 12759632 | Homo_sapiens_20_12756400-12757916-HERVHF | + | NONHSAG031288.2 |
| 20 | 40269047 | 40274769 | Homo_sapiens_20_40271576-40272881-HERVHF | + | NONHSAG081519.1 |
| 21 | 17124024 | 17127764 | Homo_sapiens_21_17123959-17125734-HERVHF | + | NONHSAG110806.1 |
| 21 | 26227947 | 26233485 | Homo_sapiens_21_26229594-26231104-HERVHF | − | NONHSAG032575.2 |
| 21 | 42800845 | 42803999 | Homo_sapiens_21_42802518-42804296-HERVHF | − | NONHSAG083198.1 |
| X | 71264372 | 71272628 | Homo_sapiens_X_71266645-71268493-HERVHF | + | ENSG00000147140 |
| X | 94698818 | 94701832 | Homo_sapiens_X_94700559-94702091-HERVHF | − | NONHSAG054922.2 |
| X | 111543806 | 111549675 | Homo_sapiens_X_111546380-111547978-HERVHF | + | NONHSAG055109.3 |
| X | 122227333 | 122227787 | Homo_sapiens_X_122224556-122226109-HERVHF | + | NONHSAG055239.2 |