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. 2022 Jun 21;10(7):1262. doi: 10.3390/microorganisms10071262

Table 1.

Differentiating characteristics of strain ZKHCc1 1396T and genomic information compared with type strains of Corallococcus.

Strains: 1 2 3 4 5 6 7 8 9 10 11 12
Temp. (°C): 30 ++ ++ ++ + + ++ +++ ++ ++ ++ +++ +++
35 +++ ++ + ++ - ++ ++ + - + + ++
pH: 5 - + + - - - + - - - + ND
6 +++ ++ + - + + + + + ++ ++ +++
7 +++ +++ ++ + + ++ +++ ++ ++ ++ +++ +++
8 +++ ++ ++ - - ++ +++ ++ ++ +++ +++ ++
9 ++ ++ ++ - - ++ +++ ++ ++ +++ + +
Biochemical
Esculin test - - + - + + + + + + - +
Gelatine test + + + - - + + - + + + +
Glucose assimilation - + - - - - - - - - - +
Maltose assimilation - - - - - - - - + - + +
Nitrate reduction - - + - - - - - - - - -
Antibiotic sensitivity
Cefotaxime - + + + + + - + + + + -
Ceftazidime - + + + + + + + + + + -
Gentamicin + + + + + + - + + + + -
Trimethoprim-
sulfamethoxazole
+ - - - - - - - - - - -
Genome comparison:
Contigs 68 961 459 625 1491 802 530 1244 863 1 36 62
Genome size (Mb) 9.44 10.15 9.47 9.98 10.51 10.39 10.79 10.53 10.35 10.08 10.41 9.23
Mol% GC 69.8 70.2 70.0 70.0 69.7 70.2 69.9 70.3 69.5 69.9 69.6 69.8
No. of Gene 7445 8611 7892 8353 9011 8442 8959 8867 8506 8148 8416 7412
Pseudogene 140 272 216 211 286 307 257 270 197 123 159 131
No. of Protein 7248 8271 7612 8079 8661 8072 8639 8539 8247 7952 8192 7221
rRNA 3 7 7 6 7 6 6 3 3 9 3 3
tRNA 50 57 53 53 54 52 53 51 55 60 58 53
Other RNA 4 4 4 4 3 5 4 4 4 4 4 4

1 Strain ZKHCc1 1396T (Accession No. JAAIYO000000000), 2 Corallococcus exercitus AB043AT (Accession No. RAVW00000000), 3 C. interemptor AB047AT (Accession No. RAWM00000000), 4 C. aberystwythensis AB050AT (Accession No. RAWK00000000), 5 C. praedator CA031BT (Accession No. RAWI00000000), 6 C. sicarius CA040BT (Accession No. RAWG00000000), 7 C. carmarthensis CA043DT (Accession No. RAWE00000000), 8 C. llansteffanensis CA051BT (Accession No. RAWB00000000), 9 C. terminator CA054AT (Accession No. RAVZ00000000), 10 C. coralloides DSM 2259T (Accession No. CP003389), 11 C. exiguus DSM 14696T (Accession No. JAAAPK000000000), and 12 C. silvisoli c25j21T (Accession No. JAAAPJ000000000). The genomes were compared using the NCBI Prokaryotic Genome. Growth indicators for pH and temperature: -, no growth; +, fair; ++, moderate; +++, best. Growth indicators for biochemical and antibiotic sensitivity tests: -, no growth; +, growth; ND, not determined. The data on pH, temperature, biochemical, antibiotic sensitivity for strains 2–12 were obtained from the previous studies of [22,63].