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. 2022 Jul 14;14(7):1536. doi: 10.3390/v14071536

Table 7.

Repeatability of PEDV/PDCoV/TGEV/SADS-CoV/XIPC 5-plex PCR by testing serial dilutions of in vitro transcribed RNA.

PEDV N-Gene IVT RNA
(Genomic Copies per Reaction)
Intra-Assay (3 Replicates for Each Dilution) Inter-Assay (3 Plates for Each Dilution)
Mean Ct Value CV, % Mean Ct Value CV, %
8.0 × 106 14.82 1.05 14.90 0.68
8.0 × 105 18.22 0.81 18.21 0.15
8.0 × 104 21.28 0.83 21.16 0.76
8.0 × 103 24.87 0.80 24.88 0.85
8.0 × 102 28.12 0.42 28.31 1.35
8.0 × 101 31.50 0.35 31.51 0.78
8.0 × 100 35.93 1.38 35.73 0.78
Average intra-assay CV, % 0.81 Average inter-assay CV, % 0.76
PDCoV N-Gene IVT RNA
(Genomic Copies per Reaction)
Intra-Assay (3 Replicates for Each Dilution) Inter-Assay (3 plates for Each Dilution)
Mean Ct Value CV, % Mean Ct Value CV, %
8.0 × 106 14.82 0.49 15.18 2.09
8.0 × 105 18.24 0.16 18.53 1.45
8.0 × 104 22.31 0.13 22.64 1.28
8.0 × 103 24.58 0.68 24.65 0.26
8.0 × 102 28.52 0.55 28.69 0.51
8.0 × 101 32.67 0.24 33.11 1.16
8.0 × 100 35.90 1.56 36.41 1.37
Average intra-assay CV, % 0.54 Average inter-assay CV, % 1.16
TGEV S-Gene IVT RNA
(Genomic Copies per Reaction)
Intra-Assay (3 Replicates for Each Dilution) Inter-assay (3 plates for each dilution)
Mean Ct Value CV, % Mean Ct Value CV, %
8.0 × 106 15.39 0.10 15.43 0.23
8.0 × 105 18.92 0.36 19.09 0.78
8.0 × 104 22.92 0.22 23.01 0.37
8.0 × 103 25.57 0.16 25.59 0.27
8.0 × 102 29.50 0.09 29.85 1.13
8.0 × 101 33.51 0.67 33.77 0.86
8.0 × 100 37.90 3.01 37.67 1.13
Average intra-assay CV, % 0.66 Average inter-assay CV, % 0.68
SADS-CoV N-Gene IVT RNA (Genomic Copies per Reaction) Intra-Assay (3 Replicates for Each Dilution) Inter-Assay (3 Plates for Each Dilution)
Mean Ct Value CV, % Mean Ct Value CV, %
1.36 × 107 14.50 0.39 14.49 0.13
1.36 × 106 17.81 1.10 17.57 1.37
1.36 × 105 21.77 0.35 21.43 1.41
1.36 × 104 24.76 0.69 24.59 0.68
1.36 × 103 28.57 0.89 28.31 0.88
1.36 × 102 31.92 0.83 32.06 1.09
1.36 × 101 35.30 1.32 35.54 0.90
Average intra-assay CV, % 0.80 Average inter-assay CV, % 0.92