. 2022 Jul 12;23(14):7710. doi: 10.3390/ijms23147710

Table 3.

List of seed protein content QTLs reported in various grain legumes.

Crop	Mapping Population/Panel of Genotypes	QTL/Gene	Marker	LG	PV%	References
Chickpea	GWAS, 187	4 QTLs, 9 significant MTAs	SSR	LG3, 5	2.4–5.1	[81]
	GWAS, 336	6 candidate genes	SNP	–	41	[170]
	ICC 995 × ICC5192, RIL (189)	q-3.2	SNP	LG3	44.3	[158]
Common bean	Xana × Cornell 49242, RIL (104)	SpA, SpB, SpE, SpI, SpJ, Pha, SpF, SpG, SpK, SpL, SpM, SpC, SpD	AFLP, RAPD, ISSR, SCAR	LG7, 4, 3, 1		[171]
	Xana × Cornell 49242, RIL (104)	One QTL	SSR	PV07	–	[172]
Ground nut	TG26 × GPBD 4, RIL (146)	8 QTLs	SSR	LG1, 3, 4, 7, 8	1.5–10.7	[173]
Pea	1238 × 1263, 110 × 807, 110 × 851 (F₂)	Convicillin (Cvc), Legumin (Lg-1)	Protein marker	LG2, 7	–	[145]
	360 × 611 (F₂)	Vicilin (Vc-1)	–	LG7	–	[146]
	Wt10245 × Wt11238, F₂ (114)	prot1 prot2 prot3 prot4 prot5	AFLP, RAPD, ISSR, STS, CAPS	LG2, 5, 7	13.1–25.5	[159]
	Térèse’ × K586, RIL (139)	14 QTLs			–	[119]
	Wt11238 × Wt3557 (F5), Wt10245 × Wt11238 (F5)	One QTL	AFLP, RAPD, STS, CAPS, ISSR	LGVa, 5b	–	[118]
	GWAS, 50	One significant SNP	SNP	–	–	[120]
	Orb × CDC Striker, Carrera × CDC Striker	8 QTLs	SNP	LG1b, 4a	16	[160]
	1–2347–144 × CDC Meadow			LG3b, 7b
	GWAS, 135 genotypes	Chr3LG5_194530376	SNP		–	[174]
	GWAS, 135	Chr3LG5_138253621, Chr3LG5_194530376	SNP	LG3, 5	–	[174]
	9 populations, RIL (1213)	21 QTL	SNP	–	–	[123]
Pigeonpea	ICP11605 × ICP 14209, ICP 8863 × ICP 11605, HPL 24 × ICP 11605, ICP 8863 × ICPL 87119, ICP 5529 × ICP 11606	48 M-QTLs for SPC	SNP	CcLG03, 11, 02, 06	0.7–23.5	[157]
Soybean	Parker × PI 468916	Two major quantitative trait locus (QTL) alleles	–	LG20	–	[136]
	A3733 × PI 437088A, RIL (76)	One QTL	Satt496 and Satt239, RAPD marker OPAW13a	LG20	–	[175]
	Essex × Williams			LG6		[176]
	PI 97100 × Coker 237			LG15, 20		[177]
	N87-984-16 × TN93-99			LG18		[178]
	N87-984-16 × TN93-99, F₆ (101)	4 QTL for cysteine, 3 QTL for methionine	Satt235, Satt252, Satt427, Satt436	D1a, F, G	–	[102]
			Satt252, Satt564, Satt590	F, G, M
	A81356022 × PI 468916		–	LG20		[156]
	G. soja (PI468916) × G. max (A81-356022) backcrossing	One QTL	SSR, AFLP	LG1	–	[162]
	G. max A81-356022 × G. soja PI468916, near isogenic lines	One QTL, 13 genes	SNP	LG20		[162]
	Magellan × PI 438489B			LG15, 5, 6		[165]
	ZDD09454 × Yudou12			LG18, 20		[179]
	GWAS, 298	17 genomic regions, Glyma20g19680, Glyma20g21030, Glyma20g21080, Glyma20g19620, Glyma20g196030, Glyma20g21040	SNP	LG8, 9, 20	–	[180]
	IL-1964 (619 accessions), IL-1966 (977 accessions), MS- 1996 (728 accessions), MS-2000 (934 accessions)	–	SNP	LG20	–	[163]
	ZYD2738 × Jidou 12, F_2:3, ZYD2738 × Jidou 9, F_2:3	qPRO_2_1, qPRO_13_1, qPRO_20_1, qPRO_6_1, qPRO_18_1	SSR	LG2, 6, 13, 18, 20	6.6–14.5	[181]
	Benning × Danbaekkong	4 QTLs		LG14, 15, 17, 20	55	[132]
	R05-1415 × R05-638			LG14, 20		[182]
	GWAS, 139	qPC19 and 8 significant genomic regions	SNP	LG5, 8, 10, 14, 16, 19	10.3	[183]
	SD02-4-59 × A02-381100 (RIL), SD02-911 × SD00-1501 (RIL)	8 QTLs	–	–	–	[184]
	Danbaekkong × Glycine soja (PI468916)	wp allele, cqSeed protein-003	–	LG20	–	[185]
	G. max (Williams 82) × G. soja (PI 483460B)	5 QTLs: qPro_06, qPro_19, qPro_20, qPro_08, qPro_13	SNP	LG6, 8, 13,19, 20	4.6–19.6	[167]
	GWAS, 144 lines derived from four parents	Glyma.03G100800, Glyma.10G207300, Glyma.12G019300, Glyma.12G112900, Glyma.14G081600, Glyma.18G028600, Glyma.18G07110, Glyma.18G071300	SNP	LG1, 2, 3, 4,6,7, 9, 10,12, 14, 18	3.84–19.21	[186]
	–	192 collinear protein QTLs, 13 candidate genes	–	–	–	[187]
	Linhefenqingdou × Meng 8206 RIL (104)	25 main effect QTLs	SNP	LG1, 4, 6, 7, 8, 9, 10, 13, 14, 17, 18, 19, 20	5.7–26.22	[169]
	GWAS, 621 accessions	Three genomic regions, 16 significant SNPs, Glyma.15g049100, Glyma.15g049200, Glyma.15g050100, Glyma.15g050600	SNP	LG4, 5, 8, 9, 10, 13, 15, 19, 20	–	[188]
	GWAS, 185	rs53140888, rs19485676, rs24787338	SNP	Chromosomes 1, 13, 20	–	[189]
		Three significant SNP markers
	(Kenfeng14× Kenfeng15) × (Heinong48×Kenfeng19), RIL (160)	34 QTLs	SSR		2.65–13.83	[189]
	G15FN-12 mutant	–	SoySNP50K BeadChip	LG12	–	[190]
	GWAS, 249	25 significant MTAs	SNP	LG2, 6, 7, 10, 13, 14, 16, 17, 18, 19	–	[191]
	AC Proteusx Maple Arrow F₅, RIL	5 QTLs	SSR, DArT and DArTseq	LG15, 20, 2, 18	70%	[168]
	X3145-B-B-3-15 × 9063, F₅, RIL; X3145-B-B-3-15 × AC Brant, F₅, RIL; X3144-48-1-B/9063, F₅, RIL; X3144-48-1-B × AC Brant, F₅, RIL; X3145-B-B-3-15 × X3144-48-1-B, F₅, RIL			LG1, 8, 9, 14, 16, 17, 19, 20
	AC X790P × S18-R6′ and ‘AC X790P × S23-T5, RILs	qPro_Gm02–3, qPro_Gm04–4, qPro_Gm06–1, qPro_Gm06–3, qPro_Gm06–6, qPro_ Gm13–4, qPro-Gm15–3	SNP	LG1, 2, 4, 5, 6, 8, 12, 13, 15, 18	10.4–21.9	[192]
	GWAS, 211	qPC-7-1, qPC-13-1, qPC-15-1	SNP	LG7, 13, 15	18–34	[164]
	(Kenfeng 14 × Kenfeng 15) × (Heinong 48 × Kenfeng 19)	85 QTL, 123 QTNs	2,232 SNPs and 63,306 SNPs	–	–	[193]
	G00-3213 × PI 594458A, 132 RIL	16 QTLs	SoySNP6k BeadChip	LG3, 6, 13, 20		[194]
	GWAS, 165	138 significant MTA,	SNP	LG7	–	[195]
		Glyma.07g175700 and Glyma.07g176000
	RIL, 944, Primus × Protina, Gallec × Sigalia, Primus × Sigalia, Protina × Sigalia, Gallec × Primus, Gallec × Protina, Sultana × Sigalia, Gallec × Protina, Gallec × Protina, Gallec × Sigalia, Primus × Sultana	qPY1, qPY2, qPY3, qPY4, qPY5, qPY6, qPY7	SNP	LG5, 6, 7, 8, 16, 18, 19, 20	15.5–60	[196]
	‘Nanxiadou 25′× Tongdou 11, RIL (178)	50QTLs, three candidate genes: Glyma.20G088000, Glyma.20G111100, Glyma.20 g087600	SNP	LG1, 2, 3, 5,6, 7, 8, 9, 10, 11, 13, 15, 16, 20	-	[197]
	PI 468916 × A81-356022, BC	Glyma.20G85100, cqSeed protein-003 QTL	SNP	LG20	-	[137]
	250, F₂	3 QTLs	Infinium Soy6KSNP Beadchips	LG6, LG13, LG20	-	[198]

AFLP = Amplified fragment length polymorphism; SNP = Single nucleotide polymorphism, SCAR = Sequenced cleaved amplified region, CAPS = cleaved amplified polymorphic sequence, RAPD = Random Amplified polymorphic DNA, SSR = Simple Sequence Repeats, ISSR = Inter Simple Sequence Repeat.