EGR	epigenetic regulator
LIHC	liver hepatocellular carcinoma
HCC	hepatocellular carcinoma
OS	overall survival
CNAs	copy number alterations
UVM	uveal melanoma
TMB	tumor mutational burden
MSI	microsatellite instability
PDL-1	programmed cell death 1 ligand 1
TCGA	The Cancer Genome Atlas
GEO	Gene Expression Omnibus
ICGC	International Cancer Genome Consortium
LGG	brain lower grade glioma
KIRP	kidney renal papillary cell carcinoma
KIRC	kidney renal clear cell carcinoma
DEGs	differentially expressed genes
FDR	false discovery rate
LASSO	least absolute shrinkage and selection operator
EZH2	enhancer of zeste 2 polycomb repressive complex 2 subunit
TRMT6	tRNA methyltransferase 6 non-catalytic subunit
YBX1	Y-box binding protein 1
IGF2BP3	insulin-like growth factor 2 mRNA binding protein 3
SUV39H2	SUV39H2 histone lysine methyltransferase
YTHDF1	YTH N6-methyladenosine RNA binding protein 1
KEGG	Kyoto Encyclopedia of Genes and Genomes
GSEA	Gene Set Enrichment Analysis
ssGSEA	single-sample gene set enrichment analysis
ROC	receiver operating characteristic
AUC	area under the curve
CTLA-4	cytotoxic T-lymphocyte associated protein 4
AFP	alpha fetoprotein
DMGs	differently methylated genes
Tregs	regulatory T cells
DFS	disease-free survival
EMT	epithelial–mesenchymal transition
ABC transporter	ATP-binding cassette transporter
SOX2	SRY-box transcription factor 2
OCT4	organic cation/carnitine transporter4
TACE	transcatheter arterial chemoembolization
ICIs	immune checkpoint inhibitors
ACT	adoptive cell therapy
MHC	major histocompatibility complex
TME	tumor microenvironment
GSVA	gene set variance analysis
CXCL9	C-X-C motif chemokine ligand 9
CXCL10	C-X-C motif chemokine ligand 10
CTCs	circulating tumor cells
DDR	DNA damage repair
MRE11	MRE11 homolog, double strand break repair nuclease
RAD50	RAD50 double strand break repair protein
NBN	nibrin