Table 2.
The number of candidate chemo- and mechano-sensory related genes of Anagrus nilaparvatae and other hymenopteran species
statistics | Mymari-dae | Agaoni-dae | Pteromalidae | Encyrti-dae | Trichogrammatidae | Braconidae | Cynipi-dae | Apidae | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Anil2 | Csol2 | Ppup1 | Tsar2 | Nvit1 | Cflo2 | Tpre2 | Tbra3 | Dall2 | Fari2 | Mdem2 | Btre1 | Amel1 | |
Genome size (Mb) | 466.2 | 280.4 | 338.1 | 236.4 | 297.3 | 53.9 | 187.64 | 235.4 | 384.4 | 153.6 | 241.2 | 1538.7 | 225.2 |
Genes (n) | 16,861 | 11,412 | 17,656 | 16,084 | 24,388 | 12,932 | 13,395 | 16,905 | 13,480 | 11,691 | 12,892 | 14,488 | 9935 |
OBP | 17 | 8(7) | 57 | 48 | 78(90) | 27 | 33 | 4 | 16 (15) | 12 | 13 | 29 | 19 (21) |
CSP | 11 | 8 | 9 | 7 | 10 (9) | 10 | 9 | 4 | 9 (9) | 10 | 9 | 17 | 9 (6) |
NPC2 | 4 | 2 | 6 | 5 | 7 | 2 | 8 | 1 | 4 | 3 | 8 | 3 | 3 |
OR | 88 | 46 | 145 | 156 | 333 (301) | 67 | 118 | 15 | 216 (201) | 218 | 147 (218) | 89 | 231 (170) |
GR | 12 | 5 (5) | 10 | 36 | 73 (58) | 19 | 26 | 15 | 39 (40) | 32 | 25 (85) | 23 | 15 (10) |
IR | 23 | 29 | 35 | 36 | 90 (19) | 30 | 44 | 16 | 40 (56) | 51 | 35 | 31 | 34 (18) |
SNMP | 13 | 11 | 12 | 9 | 25 | 22 | 29 | 14 | 18 | 17 | 18 | 20 | 24 (8) |
PPK | 1 | 4 | 9 | 10 | 17 | 9 | 10 | 6 | 8 | 14 | 5 | 8 | 9 (8) |
TRP | 9 | 11 | 12 | 10 | 45 (12) | 14 | 36 | 9 | 16 | 23 | 23 | 36 | 45 (13) |
The assembly statistics of genomes for other hymenopteran species were obtained from NCBI (https://www.ncbi.nlm.nih.gov/). Gene number refers to the number of candidate genes screened by our blast (e-value 10^-10), and the numbers in brackets were reported in other references [18–29]. Superscripts 1,2 and 3 represent assembly levels of Chromosome, Scaffold and Contig, respectively.
Anil A. nilaparvatae, Amel Apis mellifera, Btre Belonocnema treatae, Cflo Copidosoma floridanum, Csol Ceratosolen solmsi, Dall Diachasma alloeum, Fari Fopius arisanus, Mdem Microplitis demolitor, Nvit Nasonia vitripennis, Ppup Pteromalus puparum, Tbra Trichogramma brassicae, Tpre Trichogramma pretiosum, Tsar Trichomalopsis sarcophagae