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. 2022 Jul 28;5:756. doi: 10.1038/s42003-022-03702-4

Fig. 1. Characterization of significant and suggestive single-variant signals associated with fasting glucose and fasting insulin in TOPMed.

Fig. 1

TOPMed features of distinct, significant and suggestive signals associated with fasting glucose and fasting insulin (log-transformed) in pooled analysis. P-values (unconditional −log10-transformed) for glycemic and related traits (HbAa1c and type 2 diabetes) and effect allele frequency (with respect to the pooled analysis effect allele) across race/ethnicities in TOPMed are reported. Chromatin states at relevant tissues were drawn from two sets of experiments from DGA46,47; annotation PCs provide summaries of multi-faceted variant function; variants that are significant eQTLs in relevant tissues are denoted. EAF, effect allele frequency for TOPMed sample; EnhA1, Active Enhancer 1; EnhA2, Active Enhancer 2; Het, Heterochromatin; Quies, Quiescent/Low; ReprPC, Repressed PolyComb; ReprPCWk, Weak Repressed PolyComb; TssA, Active TSS; TssFlnk, Flanking TSS; TxWk, Weak Transcription; ZNF/Rpts, ZNF genes & repeats.