Table 6.
Putative E3 ubiquitin ligase genes identified in Aplysia. See Table 1 for table format description
| Required Domains | Genes | |||
|---|---|---|---|---|
| Name | Strict | Relaxed | Count | Accessions |
| HOIL1 | IPR044066, IPR000626, IPR027370, IPR001876 | IPR026261, IPR001841, IPR036443 | 1 | LOC101863809 |
| HOIP | IPR002867, IPR018997, IPR032065, IPR041031, IPR044066, IPR001876 | IPR026254, IPR001876 | 1 | LOC101849805 |
| IAPs | IPR001370 | 22 | See supplemental file SFile3 | |
| MEX3C | IPR004088, IPR001841 | IPR036612, IPR013083 | 1 | LOC101854000 |
| Pellino | IPR006800 | 1 | LOC101863733 | |
| RNF134/RIPLET | IPR042723, IPR001841 | IPR001870, IPR001841 | 2 | LOC101862807, LOC101858054 |
| SHARPIN | IPR031912, IPR001876, IPR029071 | IPR026261, IPR000626, IPR036443 | 1 | LOC101863809 |
| SOCS | IPR035862, IPR001496 | IPR036036, IPR000980 | 5 | LOC101863556, LOC101857639, LOC101854668, LOC101856240, LOC101864191 |
| TRAF | IPR001293, IPR002083, IPR001841 | IPR043211, IPR002083 | 7 | See supplemental file SFile3 |
| TRIM | IPR000315, IPR001841 | 22 | See supplemental file SFile3 | |
| TRIM25/65 | IPR001870, IPR003877, IPR001841 | IPR013320, IPR043136, IPR013083 | 2 | LOC101862807, LOC101858054 |