Table 2.
Chr | Chr length (bp) | No. N gaps | % N bp | Centromere start (bp)a | Centromere end (bp) | Centromere length (bp) | CenLen%b |
---|---|---|---|---|---|---|---|
1 | 46,699,537 | 290 | 0.062 | 34,489,422 | 36,508,933 | 2,019,511 | 4.3 |
2 | 45,526,029 | 342 | 0.075 | 24,622,375 | 25,235,431 | 613,056 | 1.3 |
3 | 45,460,755 | 323 | 0.071 | 35,843,645 | 37,229,009 | 1,385,364 | 3.0 |
4 | 44,284,954 | 293 | 0.066 | 20,712,891 | 22,388,150 | 1,675,259 | 3.8 |
5 | 43,231,337 | 286 | 0.066 | 31,983,996 | 32,181,686 | 197,690 | 0.5 |
6 | 37,537,474 | 208 | 0.055 | 28,695,852 | 29,446,671 | 750,819 | 2.0 |
7 | 36,621,300 | 257 | 0.070 | 24,207,106 | 24,865,484 | 658,378 | 1.8 |
8 | 36,842,082 | 281 | 0.076 | 25,371,840 | 26,027,713 | 655,873 | 1.8 |
9 | 33,738,042 | 199 | 0.059 | 16,594,927 | 18,347,359 | 1,752,432 | 5.2 |
10 | 33,088,173 | 293 | 0.089 | 8,356,615 | 9,717,557 | 1,360,942 | 4.1 |
11 | 29,943,784 | 180 | 0.060 | 8,606,149 | 10,200,391 | 1,594,242 | 5.3 |
12 | 29,660,084 | 314 | 0.106 | 1,124,031 | 1,806,597 | 682,566 | 2.3 |
Total | 13,346,132 |
Centromere start and end positions were approximated based on tandem repeat analysis.
Centromere percentage of total chromosome length is shown.