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. 2022 May 12;12(8):jkac112. doi: 10.1093/g3journal/jkac112

Table 2.

Chromosomal scaffold lengths and approximate centromeric repeat delimitations in the M. longifolia v3.0 genome assembly.

Chr Chr length (bp) No. N gaps % N bp Centromere start (bp)a Centromere end (bp) Centromere length (bp) CenLen%b
1 46,699,537 290 0.062 34,489,422 36,508,933 2,019,511 4.3
2 45,526,029 342 0.075 24,622,375 25,235,431 613,056 1.3
3 45,460,755 323 0.071 35,843,645 37,229,009 1,385,364 3.0
4 44,284,954 293 0.066 20,712,891 22,388,150 1,675,259 3.8
5 43,231,337 286 0.066 31,983,996 32,181,686 197,690 0.5
6 37,537,474 208 0.055 28,695,852 29,446,671 750,819 2.0
7 36,621,300 257 0.070 24,207,106 24,865,484 658,378 1.8
8 36,842,082 281 0.076 25,371,840 26,027,713 655,873 1.8
9 33,738,042 199 0.059 16,594,927 18,347,359 1,752,432 5.2
10 33,088,173 293 0.089 8,356,615 9,717,557 1,360,942 4.1
11 29,943,784 180 0.060 8,606,149 10,200,391 1,594,242 5.3
12 29,660,084 314 0.106 1,124,031 1,806,597 682,566 2.3
Total 13,346,132
a

Centromere start and end positions were approximated based on tandem repeat analysis.

b

Centromere percentage of total chromosome length is shown.