Table 1.
MSI technique | MALDI-MSI | DESI-MSI | AFADESI-MSI |
---|---|---|---|
Ionization method | Matrix-assisted laser desorption ionization (MALDI) | Desorption electrospray ionization (DESI) | Air flow-assisted desorption electrospray ionization (AFADESI) |
Type of MSI | Vacuum | Ambient | Ambient |
Max spatial resolution | Lowest at around 1.4 µm Currently, most cancer metabolomics papers conduct experiments at around 10 µm |
Lowest at 10-20 µm 50-200 µm for most of the current studies |
Around 100 µm |
Sample preparation | Frozen tissue or FFPE Matrix deposition |
Frozen tissue or FFPE | Frozen tissue or FFPE |
Key advantages | High spatial resolution and mass resolution Good for examining small samples Reliable results |
High throughput Ambient operating conditions Minimum sample preparations Quick results |
Ambient operating conditions Minimum sample preparations Wide field and large coverage Improve sensitivity and spatial resolution from DESI |
Major limitations | Extra preparation steps Vacuum condition |
Lower spatial resolution and sensitivity | Low reproducibility of results due to complex parameters |