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. Author manuscript; available in PMC: 2022 Aug 1.
Published in final edited form as: J Proteome Res. 2021 Oct 20;20(12):5227–5240. doi: 10.1021/acs.jproteome.1c00590

Figure 4.

Figure 4.

Nine datasets registered in ProteomeXchange9 and incorporated into PeptideAtlas after reanalysis with the Trans-Proteomic Pipeline10-12 in the 2021-02 build that contributed the most new PeptideAtlas canonical proteins13-21. The newly MS-based PE1 proteins arose as new PE1 proteins that were previously PE2,3,4 (gray in Figure 3) or from previously non-MS-based PE1 (orange in Figure 3). Each dataset is labeled with its identifier in the respective database, the first and last authors’ names, publication year, number of new canonical proteins, and major biological features. As of 5/17/21, there are 6330 human proteomic datasets in ProteomeXchange.