TABLE 1.
Primer | Sequence (5′ to 3′)a | Locationb |
---|---|---|
P1 | CCTTTTAAGGATCCGCCGTCTGAAAATTCACAAAATATGAATGTTA | −364 |
P2 | GGCTAATGGATCCCGTTTCATAATGTTTTCCTTTTG | +31 |
P3 | GATGAAACGCCGAGTTAACGCC | +470c |
P4 | ACTTAAGGATCCATGCCCGCAATGGGACAACC | −15 |
P5 | ATGAATGGATCCGATTGTAGCATGGTTTACCG | −250 |
P6 | ACCGCAATTACACACCAAGTTCTTAACTAATC | −7 |
P7 | TGTGTAATTGCGGTTGTCCCATTGCGGGC | +15 |
P8 | TCACACGTTCATCTTAACTAATCC | +15 |
P9 | AAGATGAACGTGTGATTATGCGGTTG | −19 |
P10 | CAGGTTATTTGACGTAAATTAAAATGC | −31 |
P11 | CGTCAAATAACCTGTAAAATATGAAC | −69 |
P12 | AATCTCTAGACACCAAGTTCTTAACTAATC | +14 |
P13 | TGGTGTCTAGAGATTATGCGGTTGTCCCATTG | −27 |
P14 | AAAGGATCAAATAATGAAACGGGATCCCGTCG | +65C |
P15 | GATCCTTTGTATAGAAAAGTAGGGGGGATTAG | +9 |
P16 | CTTAAAATTTTATGCCCGCAATGGGAC | −19 |
P17 | GGGCATAAAATTTTAAGTCAAATAATTC | −46 |
P18 | CCGGAGGGATCCGCAAATCAGCCTATTCATTG | −111 |
P19 | ATGAATTATCTAACTTAAATTAAAATGC | −31 |
P20 | TAAGTTAGATAATTCATAAAATATGAAC | −69 |
P21 | TTTTATGGATCCTTTGACTTAAATTAAAATGC | −31 |
P22 | GTCATTTTGGATCCATATTTTATGAATTATTTGAC | −45 |
P23 | ATCGTACTCGAGCCAGTAGTTCGGGCGGCCTTT | +2650 |
P24 | TAATGTCTCGAGTTTGTAAGAAAAGTAGGGGGGAT | +12 |
P25 | ACAAAAGGATCCCATTATGAAACGCCAAGCAT | +62 |
P26 | TTATAAGGATCCAGAAGCGTCATTTTAAGTTC | −65 |
Changes in the sequence from the wild-type sequence are indicated by bold type.
Location of the 3′ end of the primer relative to the sigma 70-type promoter transcription start site.
Relative to the sigma 70-type promoter transcription start site in the lacZ fusion.