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. 2022 Aug 1;22:383. doi: 10.1186/s12870-022-03768-6

Table 6.

Primer sequence, band length, total amplified bands, monomorphic, polymorphic, unique bands and percentage of polymorphism and efficiency of ISSR and SRAP analysis of three A. maurorum genotypes

Primer Name Primer sequence (5`----3`) Band length (bp) TAB NMB NPB NUB PPB MBF PIC RP
ISSR markers
49A CAC ACA CAC ACA AG 215–385 2 1 1 50% 0.83 0.22 0.67
HB-9 CAC CAC CAC GC 380–435 2 2 1.00 0.00 0.00
HB-10 GAG AGA GAG AGA CC 280–470 2 1 1 50% 0.83 0.22 0.67
HB-11 GTG TGT GTG TGT TGT CC 460–810 2 1 1 50% 0.83 0.22 0.67
HB-13 GAG GAG GAG C 470–975 3 2 1 33.33% 0.89 0.15 0.67
Total 11 7 4
Average 200–900 2.2 1.4 0.8 36.36% 0.88 0.53
DI of all ISSR primers = 0.16
SRAP markers
ME1xEM7

F ME-1: GAGTCCAAACCGGATA

R EM-7: GACTGCGTACGAATTCAA

275–1500 6 6 3 100% 0.50 0.45 4.02
ME1xEM8

ME-1: GAGTCCAAACCGGATA

EM-8: CTGCGTACGAATTCAC

320–680 4 2 2 50% 0.83 0.22 1.36
ME2xEM6

ME-2: TGA GTC CAA ACC GGA GC

EM-6: GAC TGC GTA CGA ATT CC

145–845 7 2 5 2 71.42% 0.66 0.32 3.36
ME2xEM7

ME-2: TGA GTC CAA ACC GGA GC

Em-7: GACTGCGTACGAATTCAA

135–185 3 2 1 1 33.33% 0.78 0.15 0.66
ME5xEM6

Me-5: TGAGTCCAAACCGGAAG

EM-6: GAC TGC GTA CGA ATT CC

110–200 3 1 2 1 66.66% 0.66 0.30 1.34
ME5xEM8

Me-5: TGAGTCCAAACCGGAAG

EM-8: CTGCGTACGAATTCAC

100–250 2 2 1.00 0 0
Total 25 9 16 7
Average 100–1500 4.17 1.5 2.67 1.17 64% 0.74 1.79
DI of all SRAP primers = 0.24
Combined ISSR and SRAP 36 16 20 7 55.55%

TAB Total amplified bands, NMB Number of monomorphic bands, NPB Number of polymorphic bands; NUB Number of unique bands, PPB Percentage of polymorphic bands, MBF Mean of band frequency, PIC polymorphism information content, Rp Resolving power and DI Diversity index