TABLE 1.
Genomics Regions | Number of Regions | Total Regions (%) | Hypermethylated (%) | Hypomethylated (%) |
---|---|---|---|---|
SAL_SAL-vs-METH_SAL a | ||||
DMR | 1,570 | 100 | 925 (58.9172) | 645 (41.0828) |
Exons | 71 | 4.52 | 34 (47.8873) | 37 (52.1127) |
Intergenic | 756 | 48.15 | 440 (58.2011) | 316 (41.7989) |
Introns | 700 | 44.59 | 432 (61.7143) | 268 (38.2857) |
Promoter | 43 | 2.74 | 19 (44.1860) | 24 (55.8140) |
CpG islands | 17 | 1.08 | 16 (94.1176) | 1 (5.8824) |
SAL_SAL-vs-SAL_METH b | ||||
DMR | 710 | 100 | 565 (79.5775) | 145 (20.4225) |
Exons | 43 | 6.06 | 34 (79.0698) | 9 (20.9302) |
Intergenic | 365 | 51.41 | 277 (75.8904) | 88 (24.1096) |
Introns | 285 | 40.14 | 238 (83.5088) | 47 (16.4912) |
Promoter | 17 | 2.39 | 16 (94.1176) | 1 (5.8824) |
CpG islands | 16 | 2.25 | 16 (100.000) | 0 (0.000) |
METH_SAL-vs-METH_METH c | ||||
DMR | 1,060 | 100 | 719 (67.8302) | 341 (32.1698) |
Exons | 70 | 6.60 | 49 (70.0000) | 21 (30.0000) |
Intergenic | 507 | 47.83 | 333 (65.6805) | 174 (34.3195) |
Introns | 444 | 41.89 | 310 (69.8198) | 134 (30.1802) |
Promoter | 39 | 3.68 | 27 (69.2308) | 12 (30.7692) |
CpG islands | 15 | 1.42 | 12 (80.0000) | 3 (20.00) |
SAL_METH-vs-METH_METH d | ||||
DMR | 562 | 100 | 321 (57.1174) | 241 (42.8826) |
Exons | 41 | 7.30 | 21 (51.2195) | 20 (48.7805) |
Intergenic | 255 | 45.37 | 152 (59.6078) | 103 (40.3922) |
Introns | 240 | 42.70 | 133 (55.4167) | 107 (44.5833) |
Promoter | 26 | 4.63 | 15 (57.6923) | 11 (42.3077) |
CpG islands | 7 | 1.25 | 4 (57.1429) | 3 (42.8571) |
Mice prenatally METH-exposed compared with prenatally saline-exposed.
Mice postnatally METH-exposed compared with postnatal saline-exposed.
Mice prenatally and postnatally METH-exposed compared with prenatally METH-exposed.
Mice prenatally and postnatally METH-exposed compared with postnatal METH-exposed.