Table 1.
Top upregulated genes | Top downregulated genes | ||||||
---|---|---|---|---|---|---|---|
Gene namea | Average FPKM | Average FPKM | Fold change | ||||
Saline | Dex | Fold change | Gene nameb | Saline | Dex | ||
Abca1 | 10.2 | 42.8 | 4.20 | Nr4a1 | 138.0 | 14.0 | 0.10 |
Pdk4 | 3.0 | 11.7 | 3.83 | 2010003K11Rik | 16.3 | 3.2 | 0.20 |
Zbtb16 | 6.6 | 25.4 | 3.83 | Gm13889 | 18.9 | 4.2 | 0.22 |
Chrna7 | 3.8 | 14.2 | 3.79 | 2010109I03Rik | 14.7 | 4.1 | 0.28 |
Ddit4 | 28.6 | 107.9 | 3.77 | Tnfrsf12a | 225.4 | 70.5 | 0.31 |
Fam107a | 5.3 | 19.0 | 3.60 | Mob4 | 78.9 | 25.9 | 0.33 |
Nt5e | 4.1 | 13.8 | 3.40 | Apoc4 | 11.6 | 3.9 | 0.34 |
Fzd4 | 3.6 | 11.6 | 3.25 | Coq10b | 63.5 | 21.6 | 0.34 |
Greb1 | 20.3 | 63.4 | 3.12 | Cryba4 | 24.9 | 9.0 | 0.36 |
Lrg1 | 9.2 | 28.3 | 3.07 | Yam1 | 6933.1 | 2565.2 | 0.37 |
Lnpep | 8.2 | 24.2 | 2.94 | Mapkapk3 | 13.9 | 5.3 | 0.38 |
Maf | 4.6 | 13.3 | 2.87 | Fdx1 | 2978.8 | 1129.6 | 0.38 |
Tsc22d3 | 28.3 | 80.4 | 2.84 | Avpi1 | 60.7 | 23.1 | 0.38 |
Tbx20 | 4.8 | 13.6 | 2.83 | Junb | 44.5 | 17.0 | 0.38 |
Rin2 | 6.6 | 18.2 | 2.74 | Ldlr | 31.9 | 12.3 | 0.38 |
Vcam1 | 9.3 | 25.4 | 2.72 | Hba-a2 | 17.0 | 6.7 | 0.40 |
AW551984 | 3.9 | 10.4 | 2.70 | Tubb6 | 121.8 | 49.0 | 0.40 |
Dock10 | 4.1 | 11.0 | 2.68 | Ptp4a1 | 42.6 | 17.6 | 0.41 |
Klf15 | 9.5 | 25.5 | 2.67 | Smim3 | 31.0 | 12.8 | 0.41 |
Rab3c | 8.7 | 23.1 | 2.65 | Atf4 | 146.0 | 60.9 | 0.42 |
Pde10a | 6.0 | 15.8 | 2.65 | Nr5a1 | 330.6 | 138.7 | 0.42 |
Arl4d | 5.6 | 14.5 | 2.60 | Scx | 32.3 | 13.6 | 0.42 |
Errfi1 | 14.2 | 36.6 | 2.58 | Dusp10 | 10.0 | 4.2 | 0.42 |
Hmgcs2 | 4.8 | 12.3 | 2.54 | Hes6 | 174.1 | 75.7 | 0.43 |
Atp7a | 5.4 | 13.7 | 2.54 | Srrd | 11.4 | 5.0 | 0.44 |
Fkbp5 | 47.6 | 121.0 | 2.54 | Etnk2 | 22.9 | 10.1 | 0.44 |
Bmp4 | 5.4 | 13.7 | 2.53 | Gm10275 | 16.6 | 7.5 | 0.45 |
Ston1 | 8.1 | 20.5 | 2.52 | Alas1 | 423.9 | 191.0 | 0.45 |
Ptprn2 | 5.4 | 13.6 | 2.52 | Tmem120a | 29.4 | 13.6 | 0.46 |
Irs2 | 4.3 | 10.8 | 2.49 | Adamts1 | 12.6 | 5.9 | 0.46 |
Bdkrb2 | 4.5 | 11.2 | 2.47 | Creb3l1 | 19.1 | 9.1 | 0.47 |
Klhl24 | 6.0 | 14.9 | 2.47 | Zswim4 | 16.5 | 7.9 | 0.48 |
Pdp1 | 11.9 | 29.3 | 2.47 | Dusp14 | 12.4 | 5.9 | 0.48 |
Tgfbr3 | 38.4 | 93.2 | 2.43 | Fam222a | 34.9 | 16.7 | 0.48 |
Slc9a7 | 5.0 | 12.0 | 2.41 | Akr1b7 | 1279.3 | 611.1 | 0.48 |
Rims3 | 5.1 | 12.3 | 2.40 | Cldn5 | 11.8 | 5.7 | 0.48 |
Osbpl3 | 19.7 | 47.1 | 2.39 | Naa38 | 20.3 | 9.8 | 0.48 |
Cebpd | 16.7 | 39.6 | 2.36 | 2310009B15Rik | 16.1 | 7.8 | 0.48 |
Arrdc2 | 4.4 | 10.1 | 2.32 | Agtr1b | 13.5 | 6.6 | 0.49 |
Adcyap1r1 | 12.2 | 28.3 | 2.31 | RP24-139E15.1 | 16.4 | 8.1 | 0.49 |
Klhl11 | 5.5 | 12.7 | 2.31 | Lsm5 | 14.5 | 7.2 | 0.49 |
Ncoa7 | 5.8 | 13.4 | 2.30 | Esm1 | 18.9 | 9.3 | 0.50 |
Mcf2l | 4.8 | 10.9 | 2.30 | Mir22hg | 15.2 | 7.5 | 0.50 |
Map3k6 | 8.7 | 19.9 | 2.29 | Hbb-bt | 19.5 | 9.7 | 0.50 |
Lars2 | 270.7 | 134.8 | 0.50 | ||||
aOnly list the genes that have FPKM > 10 in the Dex-treated group; bOnly list the genes that have FPKM > 10 in the saline-treated group.